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Johannes Krause

Department of Archaeogenetics
Max Planck Institute for Evolutionary Anthropology
Deutscher Platz 6
04103 Leipzig

phone: +49 341 3550 867
e-mail: krause@[>>> Please remove the text! <<<]eva.mpg.de

Curriculum Vitae
Publications

Curriculum Vitae

Prof. Dr. Johannes Krause was born in 1980 in the GDR. In 2008, he received his Ph.D. in Genetics at Leipzig University and the Max Planck Institute for Evolutionary Anthropology, Leipzig, where he was supervised by Nobel Laureate Svante Pääbo. He worked at the Max Planck Institute in Leipzig as a postdoc before he was appointed junior professor for Paleogenetics at the University of Tübingen in 2010 and subsequently full professor for Archaeo- and Paleogenetics at the same university in 2013. As one of the two founding directors of the Max Planck Institute for the Science of Human History in Jena, he headed the Department of Archaeogenetics from 2014 to 2020. In 2015 he was made an honorary professor for Archaeo- and Palaeogentics at the University of Tübingen. He is one of the founding directors of the Max Planck-Harvard Research Center for the Archaeoscience of the Ancient Mediterranean (MHAAM), established in 2017. In 2018 he became full professor for Archaeogenetics at the Institute of Zoology and Evolutionary Research, Friedrich Schiller University, Jena. In June 2020, Johannes Krause was reappointed as a director to the Max Planck Institute for Evolutionary Anthropology and his department subsequently moved to Leipzig.

Prof. Dr. Krause focuses on the analysis of ancient DNA to investigate such topics as pathogens from historic and prehistoric epidemics, human genetic history, and human evolution. He has contributed to deciphering Neanderthal genetics and the shared genetic heritage of Neanderthals and modern humans. In 2010, while working at the Max Planck Institute for Evolutionary Anthropology in Leipzig, he discovered the first genetic evidence of the Denisovans, an extinct hominin found in the Altai Mountains in Siberia. His recent work includes revealing the genetic heritage of ancient Egyptians, reconstructing the oldest modern human genome, studying late Pleistocene genomes from Africa, Central Asia and Europe, uncovering the source of the epidemic plague bacteria that periodically caused historic and prehistoric epidemics in Eurasia, studying the evolution and genetic history of pathogens such as Mycobacterium leprae, M. tuberculosis, Treponema pallidum, Hepatitis B virus, Salmonella enterica, Helicobacter pylori and the Herpes virus, as well as clarifying the complex history of Western Eurasia’s prehistoric mass migrations.

Prof. Dr. Krause has authored more than 250 publications, mainly in peer-reviewed journals, including Nature, Science, Cell, Nature Reviews Genetics, etc. He has given more than 400 invited presentations and his research has been featured in numerous television, radio, print and online media sources, including The New York Times, Washington Post, BBC, NPR, Discovery Channel, National Geographic, Zweites Deutsches Fernsehen, 3Sat, ARTE, Der Spiegel, FAS, FAZ, Die Zeit, Die Welt, Süddeutsche Zeitung, Science, Nature, and considerably more. He has also authored two international bestsellers focusing on human history: “Die Reise unserer Gene” 2019 & “Hybris – Die Reise der Menschheit” (2021).

Prof. Dr. Krause was awarded the AAAS Newcomb Cleveland Prize in 2010 and the Thuringian Research Prize for Top Performance in Basic Research in 2017. In 2020 he received the Fabio Frassetto International Prize for Paleoanthropology and in 2022 the Academy award from the Berlin-Brandenburg Academy of Sciences and Humanities. He is a member of the Heidelberg Academy of Sciences‘ WIN Kolleg, and a corresponding member of the Center for Academic Research & Training in Anthropogeny (CARTA) and the German Archeological Institute (DAI).

Curriculum Vitae Johannes Krause [PDF]

Publications

Articles | Books | Book Chapters

Articles

235

Gretzinger, J., Gibbon, V. E., Penske, S. E., Sealy, J. C., Rohrlach, A. B., Salazar-García, D. C., Krause, J., & Schiffels, S. (2024). 9,000 years of genetic continuity in southernmost Africa demonstrated at Oakhurst rockshelter. Nature Ecology & Evolution, 8(11), 2121-2134.
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234

Ghalichi, A., Reinhold, S., Rohrlach, A. B., Kalmykov, A. A., Childebayeva, A., Yu, H., Aron, F., Semerau, L., Bastert-Lamprichs, K., Belinskiy, A. B., Berezina, N. Y., Berezin, Y. B., Broomandkhoshbacht, N., Buzhilova, A. P., Erlikh, V. R., Fehren-Schmitz, L., Gambashidze, I., Kantorovich, A. R., Kolesnichenko, K. B., Lordkipanidze, D., Magomedov, R. G., Malek-Custodis, K., Mariaschk, D., Maslov, V. E., Mkrtchyan, L., Nagler, A., Fazeli Nashli, H., Ochir, M., Piotrovskiy, Y. Y., Saribekyan, M., Sheremetev, A. G., Stöllner, T., Thomalsky, J., Vardanyan, B., Posth, C., Krause, J., Warinner, C. G., Hansen, S., & Haak, W. (2024). The rise and transformation of Bronze Age pastoralists in the Caucasus (advance online). Nature.
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233

Michel, M., Skourtanioti, E., Pierini, F., Guevara, E. K., Mötsch, A., Kocher, A., Barquera, R., Bianco, R. A., Carlhoff, S., Coppola Bove, L., Freilich, S., Giffin, K., Hermes, T., Hiß, A. N., Knolle, F., Nelson, E. A., Neumann, G., Papac, L., Penske, S., Rohrlach, A. B., Salem, N., Semerau, L., Villalba-Mouco, V., Abadie, I., Aldenderfer, M., Beckett, J. F., Brown, M., Campus, F. G. R., Chenghwa, T., Cruz Berrocal, M., Damašek, L., Duffett Carlson, K. S., Durand, R., Ernée, M., Fântăneanu, C., Frenzel, H., García Atiénzar, G., Guillén, S., Hsieh, E., Karwowski, M., Kelvin, D., Kelvin, N., Khokhlov, A., Kinaston, R. L., Korolev, A., Krettek, K.-L., Küßner, M., Lai, L., Look, C., Majander, K., Mandl, K., Mazzarello, V., McCormick, M., de Miguel Ibáñez, P., Murphy, R., Németh, R. E., Nordqvist, K., Novotny, F., Obenaus, M., Olmo-Enciso, L., Onkamo, P., Orschiedt, J., Patrushev, V., Peltola, S., Romero, A., Rubino, S., Sajantila, A., Salazar-García, D. C., Serrano, E., Shaydullaev, S., Sias, E., Šlaus, M., Stančo, L., Swanston, T., Teschler-Nicola, M., Valentin, F., Van de Vijver, K., Varney, T. L., Vigil-Escalera Guirado, A., Waters, C. K., Weiss-Krejci, E., Winter, E., Lamnidis, T. C., Prüfer, K., Nägele, K., Spyrou, M., Schiffels, S., Stockhammer, P. W., Haak, W., Posth, C., Warinner, C., Bos, K. I., Herbig, A., & Krause, J. (2024). Ancient Plasmodium genomes shed light on the history of human malaria. Nature, 631(8019), 125-133.
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232

Childebayeva, A., Fricke, F., Rohrlach, A. B., Huang, L., Schiffels, S., Vesakoski, O., Mannermaa, K., Semerau, L., Aron, F., Solodovnikov, K., Rykun, M., Moiseyev, V., Khartanovich, V., Kovtun, I., Krause, J., Kuzminykh, S., & Haak, W. (2024). Bronze age Northern Eurasian genetics in the context of development of metallurgy and Siberian ancestry. Communications Biology, 7: 723.
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231

Gretzinger, J., Schmitt, F., Mötsch, A., Carlhoff, S., Lamnidis, T. C., Huang, Y., Ringbauer, H., Knipper, C., Francken, M., Mandt, F., Hansen, L., Freund, C., Posth, C., Rathmann, H., Harvati, K., Wieland, G., Granehäll, L., Maixner, F., Zink, A., Schier, W., Krausse, D., Krause, J., & Schiffels, S. (2024). Evidence for dynastic succession among early Celtic elites in Central Europe. Nature Human Behaviour.
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230

Gnecchi Ruscone, G. A., Rácz, Z., Samu, L., Szeniczey, T., Faragó, N., Knipper, C., Friedrich, R., Zlámalová, D., Traverso, L., Liccardo, S., Wabnitz, S., Popli, D. R., Wang, K., Radzeviciute, R., Gulyás, B., Koncz, I., Balogh, C., Lezsák, G. M., Mácsai, V., Bunbury, M. M. E., Spekker, O., le Roux, P., Szécsényi-Nagy, A., Mende, B. G., Colleran, H., Hajdu, T., Geary, P., Pohl, W., Vida, T., Krause, J., & Hofmanová, Z. (2024). Network of large pedigrees reveals social practices of Avar communities. Nature, 629(8011), 376-383.
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229

Sun, B., Andrades Valtueña, A., Kocher, A., Gao, S., Li, C., Fu, S., Zhang, F., Ma, P., Yang, X., Qiu, Y., Zhang, Q., Ma, J., Chen, S., Xiao, X., Damchaabadgar, S., Li, F., Kovalev, A., Hu, C., Chen, X., Wang, L., Li, W., Zhou, Y., Zhu, H., Krause, J., Herbig, A., & Cui, Y. (2024). Origin and dispersal history of Hepatitis B virus in Eastern Eurasia. Nature Communications, 15: 2951.
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228

Penske, S., Küßner, M., Rohrlach, A. B., Knipper, C., Nováček, J., Childebayeva, A., Krause, J., & Haak, W. (2024). Kinship practices at the early bronze age site of Leubingen in Central Germany. Scientific Reports, 14(1): 3871.
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227

Smith, G. M., Ruebens, K., Zavala, E. I., Sinet-Mathiot, V., Fewlass, H., Pederzani, S., Jaouen, K., Mylopotamitaki, D., Britton, K., Rougier, H., Stahlschmidt, M., Meyer, M., Meller, H., Dietl, H., Orschiedt, J., Krause, J., Schüler, T., McPherron, S. P., Weiss, M., Hublin, J.-J., & Welker, F. (2024). The ecology, subsistence and diet of ~45,000-year-old Homo sapiens at Ilsenhöhle in Ranis, Germany. Nature Ecology & Evolution.
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226

Barquera, R., Del Castillo-Chávez, O., Nägele, K., Pérez-Ramallo, P., Hernández-Zaragoza, D. I., Szolek, A., Rohrlach, A. B., Librado, P., Childebayeva, A., Bianco, R. A., Penman, B. S., Acuña-Alonzo, V., Lucas, M., Lara-Riegos, J. C., Moo-Mezeta, M. E., Torres-Romero, J. C., Roberts, P., Kohlbacher, O., Warinner, C., & Krause, J. (2024). Ancient genomes reveal insights into ritual life at Chichén Itzá. Nature, 630, 912-919.
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225

Mylopotamitaki, D., Weiss, M., Fewlass, H., Zavala, E. I., Rougier, H., Sümer, A., Hajdinjak, M., Smith, G. M., Ruebens, K., Sinet-Mathiot, V., Pederzani, S., Essel, E., Harking, F. S., Xia, H., Hansen, J., Kirchner, A., Lauer, T., Stahlschmidt, M., Hein, M., Talamo, S., Wacker, L., Meller, H., Dietl, H., Orschiedt, J., Olsen, J. V., Zeberg, H., Prüfer, K., Krause, J., Meyer, M., Welker, F., McPherron, S. P., Schüler, T., & Hublin, J.-J. (2024). Homo sapiens reached the higher latitudes of Europe by 45,000 years ago. Nature, 626, 341-346.
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224

Rohrlach, A. B., Rivollat, M., de-Miguel-Ibáñez, P., Moilanen, U., Liira, A.-M., Teixeira, J. C., Roca-Rada, X., Armendáriz-Martija, J., Boyadzhiev, K., Boyadzhiev, Y., Llamas, B., Tiliakou, A., Mötsch, A., Tuke, J., Prevedorou, E.-A., Polychronakou-Sgouritsa, N., Buikstra, J., Onkamo, P., Stockhammer, P. W., Heyne, H. O., Lemke, J. R., Risch, R., Schiffels, S., Krause, J., Haak, W., & Prüfer, K. (2024). Cases of trisomy 21 and trisomy 18 among historic and prehistoric individuals discovered from ancient DNA. Nature Communications, 15: 1294.
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223

Tian, Y., Koncz, I., Defant, S., Giostra, C., Vyas, D. N., Sołtysiak, A., Pejrani Baricco, L., Fetner, R., Posth, C., Brandt, G., Bedini, E., Modi, A., Lari, M., Vai, S., Francalacci, P., Fernandes, R., Steinhof, A., Pohl, W., Caramelli, D., Krause, J., Izdebski, A., Geary, P. J., & Veeramah, K. R. (2024). The role of emerging elites in the formation and development of communities after the fall of the Roman Empire. Proceedings of the National Academy of Sciences, 121(36): e2317868121.
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222

Carlhoff, S., Kutanan, W., Rohrlach, A. B., Posth, C., Stoneking, M., Nägele, K., Shoocongdej, R., & Krause, J. (2023). Genomic portrait and relatedness patterns of the Iron Age Log Coffin culture in northwestern Thailand. Nature Communications, 14(1): 8527.
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221

Wang, K., Prüfer, K., Krause-Kyora, B., Childebayeva, A., Schuenemann, V. J., Coia, V., Maixner, F., Zink, A., Schiffels, S., & Krause, J. (2023). High-coverage genome of the Tyrolean Iceman reveals unusually high Anatolian farmer ancestry. Cell Genomics, 3(9): 100377.
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220

Heggarty, P., Anderson, C., Scarborough, M., King, B., Bouckaert, R., Jocz, L., Kümmel, M. J., Jügel, T., Irslinger, B., Pooth, R., Liljegren, H., Strand, R. F., Haig, G., Macák, M., Kim, R. I., Anonby, E., Pronk, T., Belyaev, O., Dewey-Findell, T. K., Boutilier, M., Freiberg, C., Tegethoff, R., Serangeli, M., Liosis, N., Stroński, K., Schulte, K., Gupta, G. K., Haak, W., Krause, J., Atkinson, Q. D., Greenhill, S. J., Kühnert, D., & Gray, R. D. (2023). Language trees with sampled ancestors support a hybrid model for the origin of Indo-European languages. Science, 381(6656): eabg0818.
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219

Parker, C. E., Hiss, A. N., Spyrou, M. A., Neumann, G. U., Slavin, P., Nelson, E. A., Nagel, S., Dalidowski, X., Friederich, S., Krause, J., Herbig, A., Haak, W., & Bos, K. I. (2023). 14th century Yersinia pestis genomes support emergence of pestis secunda within Europe. PLoS Pathogens, 19(7): e1011404.
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218

Gibbon, V. E., Feris, L., Gretzinger, J., Smith, K., Hall, S., Penn, N., Mutsvangwa, T. E. M., Heale, M., Finaughty, D. A., Karanja, Y. W., Esterhuyse, J., Kotze, D., Barnes, N., Gunston, G., May, J., Krause, J., Wilkinson, C. M., Schiffels, S., Februarie, D., Alves, S., & Sealy, J. C. (2023). Confronting historical legacies of biological anthropology in South Africa—Restitution, redress and community-centered science: The Sutherland Nine. PLoS One, 18: e0284785.
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217

Fischer, M. S., & Krause, J. (2023). Human populations are not biologically and genetically discrete. British Journal of Psychology, 114(S1), 14-16.
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216

Posth, C., Yu, H., Ghalichi, A., Rougier, H., Crevecoeur, I., Huang, Y., Ringbauer, H., Rohrlach, A. B., Nägele, K., Villalba-Mouco, V., Radzeviciute, R., Ferraz, T., Stoessel, A., Tukhbatova, R., Drucker, D. G., Lari, M., Modi, A., Vai, S., Saupe, T., Scheib, C. L., Catalano, G., Pagani, L., Talamo, S., Fewlass, H., Klaric, L., Morala, A., Rué, M., Madelaine, S., Crépin, L., Caverne, J.-B., Bocaege, E., Ricci, S., Boschin, F., Bayle, P., Maureille, B., Le Brun-Ricalens, F., Bordes, J.-G., Oxilia, G., Bortolini, E., Bignon-Lau, O., Debout, G., Orliac, M., Zazzo, A., Sparacello, V., Starnini, E., Sineo, L., van der Plicht, J., Pecqueur, L., Merceron, G., Garcia, G., Leuvrey, J.-M., Garcia, C. B., Gómez-Olivencia, A., Połtowicz-Bobak, M., Bobak, D., Le Luyer, M., Storm, P., Hoffmann, C., Kabaciński, J., Filimonova, T., Shnaider, S., Berezina, N., González-Rabanal, B., Morales, M. R. G., Marín-Arroyo, A. B., López, B., Alonso-Llamazares, C., Ronchitelli, A., Polet, C., Jadin, I., Cauwe, N., Soler, J., Coromina, N., Rufí, I., Cottiaux, R., Clark, G., Straus, L. G., Julien, M.-A., Renhart, S., Talaa, D., Benazzi, S., Romandini, M., Amkreutz, L., Bocherens, H., Wißing, C., Villotte, S., de Pablo, J.-F.-L., Gómez-Puche, M., Esquembre-Bebia, M. A., Bodu, P., Smits, L., Souffi, B., Jankauskas, R., Kozakaitė, J., Cupillard, C., Benthien, H., Wehrberger, K., Schmitz, R. W., Feine, S. C., Schüler, T., Thevenet, C., Grigorescu, D., Lüth, F., Kotula, A., Piezonka, H., Schopper, F., Svoboda, J., Sázelová, S., Chizhevsky, A., Khokhlov, A., Conard, N. J., Valentin, F., Harvati, K., Semal, P., Jungklaus, B., Suvorov, A., Schulting, R., Moiseyev, V., Mannermaa, K., Buzhilova, A., Terberger, T., Caramelli, D., Altena, E., Haak, W., & Krause, J. (2023). Palaeogenomics of upper palaeolithic to neolithic European hunter-gatherers. Nature, 615, 117-126.
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215

Wang, K., Yu, H., Radzeviciute, R., Kiryushin, Y. F., Tishkin, A. A., Frolov, Y. V., Stepanova, N. F., Kiryushin, K. Y., Kungurov, A. L., Shnaider, S. V., Tur, S. S., Tiunov, M. P., Zubova, A. V., Pevzner, M., Karimov, T., Buzhilova, A., Slon, V., Jeong, C., Krause, J., & Posth, C. (2023). Middle Holocene Siberian genomes reveal highly connected gene pools throughout North Asia. Current Biology, 33(3), 423-433, e1-e5.
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214

Wang, X., Skourtanioti, E., Benz, M., Gresky, J., Ilgner, J., Lucas, M., Morsch, M., Peters, J., Pöllath, N., Ringbauer, H., le Roux, P., Schultz, M., Krause, J., Roberts, P., & Stockhammer, P. W. (2023). Isotopic and DNA analyses reveal multiscale PPNB mobility and migration across Southeastern Anatolia and the Southern Levant. Proceedings of the National Academy of Sciences of the United States of America, 120(4): e2210611120.
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213

Skourtanioti, E., Ringbauer, H., Gnecchi Ruscone, G. A., Bianco, R. A., Burri, M., Freund, C., Furtwängler, A., Gomes Martins, N. F., Knolle, F., Neumann, G., Tiliakou, A., Agelarakis, A., Andreadaki-Vlazaki, M., Betancourt, P., Hallager, B. P., Jones, O. A., Kakavogianni, O., Kanta, A., Karkanas, P., Kataki, E., Kissas, K., Koehl, R., Kvapil, L., Maran, J., McGeorge, P. J. P., Papadimitriou, A., Papathanasiou, A., Papazoglou-Manioudaki, L., Paschalidis, K., Polychronakou-Sgouritsa, N., Preve, S., Prevedorou, E.-A., Price, G., Protopapadaki, E., Schmidt-Schultz, T., Schultz, M., Shelton, K., Wiener, M. H., Krause, J., Jeong, C., & Stockhammer, P. W. (2023). Ancient DNA reveals admixture history and endogamy in the prehistoric Aegean. Nature Ecology & Evolution, 7, 290-303.
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212

Begg, T. J. A., Schmidt, A., Kocher, A., Larmuseau, M. H., Runfeldt, G., Maier, P. A., Wilson, J. D., Barquera, R., Maj, C., Szolek, A., Sager, M., Clayton, S., Peltzer, A., Hui, R., Ronge, J., Reiter, E., Freund, C., Burri, M., Aron, F., Tiliakou, A., Osborn, J., Behar, D. M., Boecker, M., Brandt, G., Cleynen, I., Strassburg, C., Prüfer, K., Kühnert, D., Meredith, W. R., Nöthen, M. M., Attenborough, R. D., Kivisild, T., & Krause, J. (2023). Genomic analyses of hair from Ludwig van Beethoven. Current Biology, 33(8), 1431-1447.e22.
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211

Penske, S. E., Rohrlach, A. B., Childebayeva, A., Gnecchi Ruscone, G. A., Schmid, C., Spyrou, M. A., Neumann, G., Atanassova, N., Beutler, K., Boyadzhiev, K., Boyadzhiev, Y., Bruyako, I., Chohadzhiev, A., Govedarica, B., Karaucak, M., Krauss, R., Leppek, M., Manzura, I., Privat, K., Ross, S., Slavchev, V., Sobotkova, A., Toderaş, M., Valchev, T., Ringbauer, H., Stockhammer, P. W., Hansen, S., Krause, J., & Haak, W. (2023). Early contact between late farming and pastoralist societies in southeastern Europe. Nature, 620, 358-365.
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210

Rivollat, M., Rohrlach, A. B., Ringbauer, H., Childebayeva, A., Mendisco, F., Barquera Lozano, R. J., Szolek, A., Le Roy, M., Colleran, H., Tuke, J., Aron, F., Pemonge, M.-H., Späth, E., Télouk, P., Rey, L., Goude, G., Balter, V., Krause, J., Rottier, S., Deguilloux, M.-F., & Haak, W. (2023). Extensive pedigrees reveal the social organization of a Neolithic community. Nature, 620, 600-606.
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209

Villalba-Mouco, V., Loosdrecht, M. S. v. d., Rohrlach, A. B., Fewlass, H., Talamo, S., Yu, H., Aron, F., Lalueza-Fox, C., Cabello, L., Cantalejo Duarte, P., Ramos-Muñoz, J., Posth, C., Krause, J., Weniger, G.-C., & Haak, W. (2023). A 23,000-year-old southern Iberian individual links human groups that lived in Western Europe before and after the Last Glacial Maximum. Nature Ecology & Evolution, 7, 597-609.
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208

Villalba-Mouco, V., Oliart, C., Rihuete-Herrada, C., Rohrlach, A. B., Fregeiro, M. I., Childebayeva, A., Ringbauer, H., Olalde, I., Celdrán Beltrán, E., Puello-Mora, C., Valério, M., Krause, J., Lull, V., Micó, R., Risch, R., & Haak, W. (2022). Kinship practices in the early state El Argar society from Bronze Age Iberia. Scientific Reports, 12: 22415.
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207

Wang, K., Bleasdale, M., Le Moyne, C., Freund, C., Krause, J., Boivin, N., & Schiffels, S. (2022). 4000-year-old hair from the Middle Nile highlights unusual ancient DNA degradation pattern and a potential source of early eastern Africa pastoralists. Scientific Reports, 12: 20939.
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206

Lee, D., Jeon, C. L., Kang, J., Burri Promerová, M., Krause, J., Woo, E. J., & Jeong, C. (2022). Genomic detection of a secondary family burial in a single jar coffin in early Medieval Korea. American Journal of Biological Anthropology, 179(4), 585-597.
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205

Richards, M., Smith, C., Nehlich, O., Grimes, V., Weston, D., Mittnik, A., Krause, J., Dobney, K., Tzedakis, Y., & Martlew, H. (2022). Finding Mycenaeans in Minoan Crete? Isotope and DNA analysis of human mobility in Bronze Age Crete. PLOS ONE, 17(8): e0272144.
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204

Guellil, M., van Dorp, L., Inskip, S. A., Dittmar, J. M., Saag, L., Tambets, K., Hui, R., Rose, A., D’Atanasio, E., Kriiska, A., Varul, L., Koekkelkoren, A., Goldina, R. D., Cessford, C., Solnik, A., Metspalu, M., Krause, J., Herbig, A., Robb, J. E., Houldcroft, C. J., & Scheib, C. L. (2022). Ancient herpes simplex 1 genomes reveal recent viral structure in Eurasia. Science Advances, 8(30).
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203

Neumann, G., Skourtanioti, E., Burri Promerová, M., Nelson, E. A., Michel, M., Hiß, A. N., McGeorge, P. J., Betancourt, P. P., Spyrou, M. A., Krause, J., & Stockhammer, P. W. (2022). Ancient Yersinia pestis and Salmonella enterica genomes from Bronze Age Crete. Current Biology, 32(16): e8, pp. 3641-3649.
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202

Spyrou, M. A., Musralina, L., Gnecchi Ruscone, G. A., Kocher, A., Borbone, P.-G., Khartanovich, V. I., Buzhilova, A., Djansugurova, L., Bos, K. I., Kühnert, D., Haak, W., Slavin, P., & Krause, J. (2022). The source of the Black Death in fourteenth-century central Eurasia. Nature, 606, 718-724.
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201

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Posth, C., Zaro, V., Spyrou, M. A., Vai, S., Gnecchi Ruscone, G. A., Modi, A., Peltzer, A., Mötsch, A., Nägele, K., Vågene, Å. J., Nelson, E. A., Radzeviciute, R., Freund, C., Bondioli, L. M., Cappuccini, L., Frenzel, H., Pacciani, E., Boschin, F., Capecchi, G., Martini, I., Moroni, A., Ricci, S., Sperduti, A., Turchetti, M. A., Riga, A., Zavattaro, M., Zifferero, A., Heyne, H. O., Fernández-Domínguez, E., Kroonen, G. J., McCormick, M., Haak, W., Lari, M., Barbujani, G., Bondioli, L., Bos, K. I., Caramelli, D., & Krause, J. (2021). The origin and legacy of the Etruscans through a 2000-year archeogenomic time transect. Science Advances, 7(39): eabi7673.
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176

Wu, X., Ning, C., Key, F. M., Andrades Valtueña, A., Lankapalli, A. K., Gao, S., Yang, X., Zhang, F., Liu, L., Nie, Z., Ma, J., Krause, J., Herbig, A., & Cui, Y. (2021). A 3,000-year-old, basal S. enterica lineage from Bronze Age Xinjiang suggests spread along the Proto-Silk Road. PLoS Pathogens, 17: e1009886.
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Carlhoff, S., Duli, A., Nägele, K., Nur, M., Skov, L., Sumantri, I., Oktaviana, A. A., Hakim, B., Burhan, B., Syahdar, F. A., McGahan, D. P., Bulbeck, D., Perston, Y. L., Newman, K., Saiful, A. M., Ririmasse, M., Chia, S., Hasanuddin, Pulubuhu, D. A. T., Suryatman, Supriadi, Jeong, C., Peter, B. M., Prüfer, K., Powell, A., Krause, J., Posth, C., & Brumm, A. (2021). Genome of a middle Holocene hunter-gatherer from Wallacea. Nature, 596, 543-547.
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174

Papac, L., Ernée, M., Dobeš, M., Langová, M., Rohrlach, A. B., Aron, F., Neumann, G. U., Spyrou, M. A., Rohland, N., Velemínský, P., Kuna, M., Brzobohatá, H., Culleton, B., Daněček, D., Danielisová, A., Dobisíková, M., Hložek, J., Kennett, D. J., Klementová, J., Kostka, M., Krištuf, P., Kuchařík, M., Hlavová, J. K., Limburský, P., Malyková, D., Mattiello, L., Pecinovská, M., Petriščáková, K., Průchová, E., Stránská, P., Smejtek, L., Špaček, J., Šumberová, R., Švejcar, O., Trefný, M., Vávra, M., Kolář, J., Heyd, V., Krause, J., Pinhasi, R., Reich, D., Schiffels, S., & Haak, W. (2021). Dynamic changes in genomic and social structures in third millennium BCE central Europe. Science Advances, 7(35): eabi6941.
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173

Ingman, T., Eisenmann, S., Skourtanioti, E., Akar, M., Ilgner, J., Gnecchi Ruscone, G. A., le Roux, P., Shafiq, R., Neumann, G. U., Keller, M., Freund, C., Marzo, S., Lucas, M., Krause, J., Roberts, P., Yener, K. A., & Stockhammer, P. W. (2021). Human mobility at Tell Atchana (Alalakh), Hatay, Turkey during the 2nd millennium BC: Integration of isotopic and genomic evidence. PLoS One, 16(6): e0241883.
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172

Pohl, W., Krause, J., Vida, T., & Geary, P. (2021). Integrating genetic, archaeological, and historical perspectives on Eastern Central Europe, 400–900 AD: Brief description of the ERC Synergy Grant – HistoGenes 8564531. Historical Studies on Central Europe, 1(1): 1.09, pp. 213-228.
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171

Gnecchi-Ruscone, G. A., Khussainova, E., Kahbatkyzy, N., Musralina, L., Spyrou, M. A., Bianco, R. A., Radzeviciute, R., Martins, N. F. G., Freund, C., Iksan, O., Garshin, A., Zhaniyazov, Z., Bekmanov, B., Kitov, E., Samashev, Z., Beisenov, A., Berezina, N., Berezin, Y., B{í}ró, A. Z., Évinger, S., Bissembaev, A., Akhatov, G., Mamedov, A., Onggaruly, A., Voyakin, D., Chotbayev, A., Kariyev, Y., Buzhilova, A., Djansugurova, L., Jeong, C., & Krause, J. (2021). Ancient genomic time transect from the Central Asian Steppe unravels the history of the Scythians. Science Advances, 7(13): eabe4414.
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170

Orlando, L., Allaby, R., Skoglund, P., Sarkissian, C. D., Stockhammer, P. W., Ávila-Arcos, M. C., Fu, Q., Krause, J., Willerslev, E., Stone, A. C., & Warinner, C. G. (2021). Ancient DNA analysis. Nature reviews: Methods primers, 1(14): s43586-020-00011-0.
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169

Fellows Yates, J. A., Velsko, I. M., Aron, F., Posth, C., Hofman, C. A., Austin, R. M., Parker, C. E., Mann, A. E., Nägele, K., Arthur, K. W., Arthur, J. W., Bauer, C. C., Crevecoeur, I., Cupillard, C., Curtis, M. C., Dalén, L., Díaz-Zorita Bonilla, M., Díez Fernández-Lomana, J. C., Drucker, D. G., Escribano Escrivá, E., Francken, M., Gibbon, V. E., González Morales, M. R., Grande Mateu, A., Harvati, K., Henry, A. G., Humphrey, L., Menéndez, M., Mihailović, D., Peresani, M., Rodríguez Moroder, S., Roksandic, M., Rougier, H., Sázelová, S., Stock, J. T., Straus, L. G., Svoboda, J., Teßmann, B., Walker, M. J., Power, R. C., Lewis, C. M., Sankaranarayanan, K., Guschanski, K., Wrangham, R. W., Dewhirst, F. E., Salazar-García, D. C., Krause, J., Herbig, A., & Warinner, C. G. (2021). The evolution and changing ecology of the African hominid oral microbiome. Proceedings of the National Academy of Sciences, 118(20): e2021655118.
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168

Haller, M., Callan, K., Susat, J., Flux, A. L., Immel, A., Franke, A., Herbig, A., Krause, J., Kupczok, A., Fouquet, G., Hummel, S., Rieger, D., Nebel, A., & Krause-Kyora, B. (2021). Mass burial genomics reveals outbreak of enteric paratyphoid fever in the Late Medieval trade city Lübeck. iScience, 24(5): 102419.
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167

Immel, A., Pierini, F., Rinne, C., Meadows, J., Barquera, R., Szolek, A., Susat, J., Böhme, L., Dose, J., Bonczarowska, J., Drummer, C., Fuchs, K., Ellinghaus, D., Kässens, J. C., Furholt, M., Kohlbacher, O., Schade-Lindig, S., Franke, A., Schreiber, S., Krause, J., Müller, J., Lenz, T. L., Nebel, A., & Krause-Kyora, B. (2021). Genome-wide study of a Neolithic Wartberg grave community reveals distinct HLA variation and hunter-gatherer ancestry. Communications Biology, 4: 113.
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166

Lösch, S., Ramstein, M., Hafner, A., & Krause, J. (2021). Oberbipp - Ein neolithischer Dolmen im Oberaargau, die Toten und was wir über sie wissen. AS: Archäologie Schweiz: Mitteilungsblatt von "Archäologie Schweiz" = Archéologie Suisse: Bulletin d'"Archéologie Suisse" = Archeologia Svizzera: Bollettino di "Archeologia Svizzera", 44(1), 4-15.
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165

Pohl, W., Krause, J., Vida, T., & Geary, P. (2021). Integracija genetskih, arheoloških in zgodovinskih pogledov na vzhodno in srednjo Evropo med letoma 400 in 900. Kratek opis projekta ERC Synergy Grant - HistoGenes 8564531. Arheo, 38, 73-81.
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164

Porges, K., Bergens, F., Hoßfeld, U., & Krause, J. (2021). Die "Jenaer Erklärung" im (Biologie-)Unterricht: Rassismus zum Thema machen! MNU-Journal, 74(2), 154-158.
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163

Prüfer, K., Posth, C., Yu, H., Stoessel, A., Spyrou, M. A., Deviese, T., Mattonai, M., Ribechini, E., Higham, T., Velemínský, P., Brůžek, J., & Krause, J. (2021). A genome sequence from a modern human skull over 45,000 years old from Zlatý kůň in Czechia. Nature Ecology & Evolution, 5, 820-825.
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162

Rohrlach, A. B., Papac, L., Childebayeva, A., Rivollat, M., Villalba-Mouco, V., Neumann, G. U., Penske, S., Skourtanioti, E., Loosdrecht, M. v. d., Akar, M., Boyadzhiev, K., Boyadzhiev, Y., Deguilloux, M.-F., Dobeš, M., Erdal, Y. S., Ernée, M., Frangipane, M., Furmanek, M., Friederich, S., Ghesquière, E., Hałuszko, A., Hansen, S., Küßner, M., Mannino, M., Özbal, R., Reinhold, S., Rottier, S., Salazar-García, D. C., Diaz, J. S., Stockhammer, P. W., de Muñoz, T., Roca, C., Yener, K. A., Posth, C., Krause, J., Herbig, A., & Haak, W. (2021). Using Y-chromosome capture enrichment to resolve haplogroup H2 shows new evidence for a two-path Neolithic expansion to Western Europe. Scientific Reports, 11: 15005.
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161

Wang, C.-C., Yeh, H.-Y., Popov, A. N., Zhang, H.-Q., Matsumura, H., Sirak, K., Cheronet, O., Kovalev, A., Rohland, N., Kim, A. M., Mallick, S., Bernardos, R., Tumen, D., Zhao, J., Liu, Y.-C., Liu, J.-Y., Mah, M., Wang, K., Zhang, Z., Adamski, N., Broomandkhoshbacht, N., Callan, K., Candilio, F., Carlson, K. S. D., Culleton, B. J., Eccles, L., Freilich, S., Keating, D., Lawson, A. M., Mandl, K., Michel, M., Oppenheimer, J., Özdoğan, K. T., Stewardson, K., Wen, S., Yan, S., Zalzala, F., Chuang, R., Huang, C.-J., Looh, H., Shiung, C.-C., Nikitin, Y. G., Tabarev, A. V., Tishkin, A. A., Lin, S., Sun, Z.-Y., Wu, X.-M., Yang, T.-L., Hu, X., Chen, L., Du, H., Bayarsaikhan, J., Mijiddorj, E., Erdenebaatar, D., Iderkhangai, T.-O., Myagmar, E., Kanzawa-Kiriyama, H., Nishino, M., Shinoda, K.-i., Shubina, O. A., Guo, J., Cai, W., Deng, Q., Kang, L., Li, D., Li, D., Lin, R., Nini, Shrestha, R., Wang, L.-X., Wei, L., Xie, G., Yao, H., Zhang, M., He, G., Yang, X., Hu, R., Robbeets, M., Schiffels, S., Kennett, D. J., Jin, L., Li, H., Krause, J., Pinhasi, R., & Reich, D. (2021). Genomic insights into the formation of human populations in East Asia. Nature, 591, 413-419.
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160

Furtwängler, A., Neukamm, J., Böhme, L., Reiter, E., Vollstedt, M., Arora, N., Singh, P., Cole, S. T., Knauf, S., Calvignac-Spencer, S., Krause-Kyora, B., Krause, J., Schuenemann, V. J., & Herbig, A. (2020). Comparison of target enrichment strategies for ancient pathogen DNA. Biotechniques, 69(6), 455-459.
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159

McDonald, S. K., Matisoo-Smith, E. A., Buckley, H. R., Walter, R. K., Aung, H. L., Collins, C. J., Cook, G. M., Kardailsky, O., Krause, J., & Knapp, M. (2020). 'TB or not TB': The conundrum of pre-European contact tuberculosis in the Pacific. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences, 375(1812): 20190583.
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158

Jeong, C., Wang, K., Wilkin, S., Taylor, W. T. T., Miller, B. K., Bemmann, J. H., Stahl, R., Chiovelli, C., Knolle, F., Ulziibayar, S., Khatanbaatar, D., Erdenebaatar, D., Erdenebat, U., Ochir, A., Ankhsanaa, G., Vanchigdash, C., Ochir, B., Munkhbayar, C., Tumen, D., Kovalev, A., Kradin, N., Bazarov, B. A., Miyagashev, D. A., Konovalov, P. B., Zhambaltarova, E., Ventresca Miller, A. R., Haak, W., Schiffels, S., Krause, J., Boivin, N. L., Erdene, M., Hendy, J., & Warinner, C. G. (2020). A dynamic 6,000-year genetic history of Eurasia’s eastern steppe. Cell, 183(4), 890-904.e29.
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157

Forth, J. H., Forth, L. F., Lycett, S., Bell-Sakyi, L., Keil, G. M., Blome, S., Calvignac-Spencer, S., Wissgott, A., Krause, J., Höper, D., Kampen, H., & Beer, M. (2020). Identification of African swine fever virus-like elements in the soft tick genome provides insights into the virus’ evolution. BMC Biology, 18(1): 136.
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156

Key, F. M., Posth, C., Esquivel-Gomez, L. R., Hübler, R., Spyrou, M. A., Neumann, G., Furtwängler, A., Sabin, S., Burri, M., Wissgott, A., Lankapalli, A. K., Vågene, Å. J., Meyer, M., Nagel, S., Tukhbatova, R. I., Khokhlov, A., Chizhevsky, A., Hansen, S., Belinsky, A. B., Kalmykov, A., Kantorovich, A. R., Maslov, V. E., Stockhammer, P. W., Vai, S., Zavattaro, M., Riga, A., Caramelli, D., Skeates, R., Beckett, J., Gradoli, M. G., Steuri, N., Hafner, A., Ramstein, M., Siebke, I., Lösch, S., Erdal, Y. S., Alikhan, N.-F., Zhou, Z., Achtman, M., Bos, K. I., Reinhold, S., Haak, W., Kühnert, D., Herbig, A., & Krause, J. (2020). Emergence of human-adapted Salmonella enterica is linked to the Neolithization process. Nature Ecology & Evolution, 4, 324-333.
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155

Siebke, I., Furtwängler, A., Steuri, N., Hafner, A., Ramstein, M., Krause, J., & Lösch, S. (2020). Crops vs. animals: Regional differences in subsistence strategies of Swiss Neolithic farmers revealed by stable isotopes. Archaeological and Anthropological Sciences, 12(10): 235.
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154

Barquera, R., Hernández-Zaragoza, D. I., Bravo-Acevedo, A., Arrieta-Bolaños, E., Clayton, S., Acuña-Alonzo, V., Martínez-Álvarez, J. C., López-Gil, C., Adalid-Sáinz, C., Vega-Martínez, M. d. R., Escobedo-Ruíz, A., Juárez-Cortés, E. D., Immel, A., Pacheco-Ubaldo, H., González-Medina, L., Lona-Sánchez, A., Lara-Riegos, J., Sánchez-Fernández, M. G. d. J., Díaz-López, R., Guizar-López, G. U., Medina-Escobedo, C. E., Arrazola-García, M. A., Montiel-Hernández, G. D., Hernández-Hernández, O., la Cruz, R.-d., Rocío, F. d., Juárez-Nicolás, F., Pantoja-Torres, J. A., Rodríguez-Munguía, T. J., Juárez-Barreto, V., Delgado-Aguirre, H., Escutia-González, A. B., Goné-Vázquez, I., Benítez-Arvizu, G., Arellano-Prado, F. P., García-Arias, V. E., Rodríguez-López, M. E., Méndez-Mani, P., García-Álvarez, R., González-Martínez, M. d. R., Aquino-Rubio, G., Escareño-Montiel, N., Vázquez-Castillo, T. V., Uribe-Duarte, M. G., Ruíz-Corral, M. d. J., Ortega-Yáñez, A., Bernal-Felipe, N., Gómez-Navarro, B., Arriaga-Perea, A. J., Martínez-Bezies, V., Macías-Medrano, R. M., Aguilar-Campos, J. A., Solís-Martínez, R., Serrano-Osuna, R., Sandoval-Sandoval, M. J., Jaramillo-Rodríguez, Y., Salgado-Adame, A., Juárez-de la Cruz, F., Novelo-Garza, B., Pavón-Vargas, M. d. l. Á., Salgado-Galicia, N., Bortolini, M. C., Gallo, C., Bedoya, G., Rothhammer, F., González-José, R., Ruiz-Linares, A., Canizales-Quinteros, S., Romero-Hidalgo, S., Krause, J., Zúñiga, J., Yunis, E. J., Bekker-Méndez, C., & Granados, J. (2020). The immunogenetic diversity of the HLA system in Mexico correlates with underlying population genetic structure. Human Immunology, 81(9): 2020.06.008, pp. 461-474.
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153

Fischer, M. S., Hoßfeld, U., Krause, J., & Richter, S. (2020). Jena, Haeckel und die Frage nach den Menschenrassen oder der Rassismus macht Rassen. Zoologie: Mitteilungen der Deutschen Zoologischen Gesellschaft, 2020, 7-32.
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152

Neukamm, J., Pfrengle, S., Molak, M., Seitz, A., Francken, M., Eppenberger, P., Avanzi, C., Reiter, E., Urban, C., Welte, B., Stockhammer, P. W., Teßmann, B., Herbig, A., Harvati, K., Nieselt, K., Krause, J., & Schuenemann, V. J. (2020). 2000-year-old pathogen genomes reconstructed from metagenomic analysis of Egyptian mummified individuals. BMC Biology, 18(1): 108.
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151

Majander, K., Pfrengle, S., Kocher, A., Neukamm, J., du Plessis, L., Pla-Díaz, M., Arora, N., Akgül, G., Salo, K., Schats, R., Inskip, S., Oinonen, M., Valk, H., Malve, M., Kriiska, A., Onkamo, P., González-Candelas, F., Kühnert, D., Krause, J., & Schuenemann, V. J. (2020). Ancient bacterial genomes reveal a high diversity of Treponema pallidum Strains in early Modern Europe. Current Biology, 30: 2020.07.058, pp. 1-16.
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150

Barquera, R., & Krause, J. (2020). An ancient view on host pathogen interaction across time and space. Current Opinion in Immunology, 65, 65-69.
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149

Nägele, K., Posth, C., Iraeta Orbegozo, M., Chinique de Armas, Y., Hernández Godoy, S. T., Gonzáles Herrera, U. M., Nieves-Colón, M. A., Sandoval-Velasco, M., Mylopotamitaki, D., Radzeviciute, R., Laffoon, J., Pestle, W. J., Ramos-Madrigal, J., Lamnidis, T. C., Schaffer, W. C., Carr, R. S., Day, J. S., Arredondo Antúnez, C., Rangel Rivero, A., Martínez-Fuentes, A. J., Crespo-Torres, E., Roksandic, I., Stone, A. C., Lalueza-Fox, C., Hoogland, M., Roksandic, M., Hofman, C. L., Krause, J., & Schroeder, H. (2020). Genomic insights into the early peopling of the Caribbean. Science, 369(6502), 456-460.
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148

Wang, K., Goldstein, S. T., Bleasdale, M., Clist, B., Bostoen, K., Bakwa-Lufu, P., Buck, L. T., Crowther, A., Dème, A., McIntosh, R. J., Mercader, J., Ogola, C., Power, R. C., Sawchuk, E. A., Robertshaw, P., Wilmsen, E. N., Petraglia, M. D., Ndiema, E., Manthi, F. K., Krause, J., Roberts, P., Boivin, N. L., & Schiffels, S. (2020). Ancient genomes reveal complex patterns of population movement, interaction, and replacement in sub-Saharan Africa. Science Advances, 6(24): eaaz0183.
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147

Yu, H., Spyrou, M. A., Karapetian, M., Shnaider, S., Radzeviciute, R., Nägele, K., Neumann, G. U., Penske, S. E., Zech, J., Lucas, M., LeRoux, P., Roberts, P., Pavlenok, G., Buzhilova, A., Posth, C., Jeong, C., & Krause, J. (2020). Paleolithic to Bronze Age Siberians reveal connections with first Americans and across Eurasia. Cell, 181(6), 1232-1245.e20.
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146

Barquera, R., Lamnidis, T. C., Lankapalli, A. K., Kocher, A., Hernández-Zaragoza, D. I., Nelson, E. A., Zamora-Herrera, A. C., Perez Ramallo, P., Bernal-Felipe, N., Immel, A., Bos, K., Acuña-Alonzo, V., Barbieri, C., Roberts, P., Herbig, A., Kühnert, D., Márquez-Morfín, L., & Krause, J. (2020). Origin and health status of first-generation Africans from early colonial Mexico. Current Biology, 30(11): 2020.04.002, pp. 2078-2091.e11.
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145

Ning, C., Li, T., Wang, K., Zhang, F., Li, T., Wu, X., Gao, S., Zhang, Q., Zhang, H., Hudson, M., Dong, G., Wu, S., Fang, Y., Liu, C., Feng, C., Li, W., Han, T., Li, R., Wei, J., Zhu, Y., Zhou, Y., Wang, C.-C., Fan, S., Xiong, Z., Sun, Z., Ye, M., Sun, L., Wu, X., Liang, F., Cao, Y., Wei, X., Zhu, H., Zhou, H., Krause, J., Robbeets, M., Jeong, C., & Cui, Y. (2020). Ancient genomes from northern China suggest links between subsistence changes and human migration. Nature Communications, 11: 2700.
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144

Rivollat, M., Jeong, C., Schiffels, S., Kücükkalıpcı, İ., Pemonge, M.-H., Rohrlach, A. B., Alt, K. W., Binder, D., Friederich, S., Ghesquière, E., Gronenborn, D., Laporte, L., Lefranc, P., Meller, H., Réveillas, H., Rosenstock, E., Rottier, S., Scarre, C., Soler, L., Wahl, J., Krause, J., Deguilloux, M.-F., & Haak, W. (2020). Ancient genome-wide DNA from France highlights the complexity of interactions between Mesolithic hunter-gatherers and Neolithic farmers. Science Advances, 6(22): eaaz5344.
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143

Skourtanioti, E., Erdal, Y. S., Frangipane, M., Balossi Restelli, F., Yener, K. A., Pinnock, F., Matthiae, P., Özbal, R., Schoop, U.-D., Guliyev, F., Akhundov, T., Lyonnet, B., Hammer, E. L., Nugent, S. E., Burri, M., Neumann, G. U., Penske, S. E., Ingman, T., Akar, M., Shafiq, R., Palumbi, G., Eisenmann, S., D’Andrea, M., Rohrlach, A. B., Warinner, C., Jeong, C., Stockhammer, P. W., Haak, W., & Krause, J. (2020). Genomic history of Neolithic to Bronze Age Anatolia, Northern Levant, and Southern Caucasus. Cell, 181(5), 1158-1175.e28.
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142

Parker, E. C., Rohrlach, A. B., Friederich, S., Nagel, S., Meyer, M., Krause, J., Bos, K. I., & Haak, W. (2020). A systematic investigation of human DNA preservation in medieval skeletons. Scientific Reports, 10(1): 18225.
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141

Loog, L., Thalmann, O., Sinding, M.-H.-S., Schuenemann, V. J., Perri, A., Germonpré, M., Bocherens, H., Witt, K. E., Samaniego Castruita, J. A., Velasco, M. S., Lundstrøm, I. K. C., Wales, N., Sonet, G., Frantz, L., Schroeder, H., Budd, J., Jimenez, E.-L., Fedorov, S., Gasparyan, B., Kandel, A. W., Lázničková-Galetová, M., Napierala, H., Uerpmann, H.-P., Nikolskiy, P. A., Pavlova, E. Y., Pitulko, V. V., Herzig, K.-H., Malhi, R. S., Willerslev, E., Hansen, A. J., Dobney, K., Gilbert, M. T. P., Krause, J., Larson, G., Eriksson, A., & Manica, A. (2020). Ancient DNA suggests modern wolves trace their origin to a Late Pleistocene expansion from Beringia. Molecular Ecology, 29(9): 15329, pp. 1596-1610.
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140

Musralina, L. Z., Djansugurova, L. B., & Krause, J. (2020). Features of the study of ancient pathogens. Журнал проблем эволюции открытых систем, 22(1), 83-89.
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Furtwängler, A., Rohrlach, A. B., Lamnidis, T. C., Papac, L., Neumann, G., Siebke, I., Reiter, E., Steuri, N., Hald, J., Denaire, A., Schnitzler, B., Wahl, J., Ramstein, M., Schuenemann, V. J., Stockhammer, P. W., Hafner, A., Lösch, S., Haak, W., Schiffels, S., & Krause, J. (2020). Ancient genomes reveal social and genetic structure of Late Neolithic Switzerland. Nature Communications, 11: 1915.
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Marcus, J. H., Posth, C., Ringbauer, H., Lai, L., Skeates, R., Sidore, C., Beckett, J., Furtwängler, A., Olivieri, A., Chiang, C. W. K., Al-Asadi, H., Dey, K., Joseph, T. A., Liu, C.-C., Der Sarkissian, C., Radzeviciute, R., Michel, M., Gradoli, M. G., Marongiu, P., Rubino, S., Mazzarello, V., Rovina, D., La Fragola, A., Serra, R. M., Bandiera, P., Bianucci, R., Pompianu, E., Murgia, C., Guirguis, M., Orquin, R. P., Tuross, N., van Dommelen, P., Haak, W., Reich, D., Schlessinger, D., Cucca, F., Krause, J., & Novembre, J. (2020). Genetic history from the Middle Neolithic to present on the Mediterranean island of Sardinia. Nature Communications, 11(1): 939.
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Hübler, R., Key, F. M., Warinner, C. G., Bos, K. I., Krause, J., & Herbig, A. (2019). HOPS: Automated detection and authentication of pathogen DNA in archaeological remains. Genome Biology, 20: 280.
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Fischer, M. S., Hoßfeld, U., Krause, J., & Richter, S. (2019). Jenaer Erklärung: das Konzept der Rasse ist das Ergebnis von Rassismus und nicht dessen Voraussetzung. Biologie in unserer Zeit, 49(6), 399-402.
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Gretzinger, J., Molak, M., Reiter, E., Pfrengle, S., Urban, C., Neukamm, J., Blant, M., Conard, N. J., Cupillard, C., Dimitrijević, V., Drucker, D. G., Hofman-Kamińska, E., Kowalczyk, R., Krajcarz, M. T., Krajcarz, M., Münzel, S. C., Peresani, M., Romandini, M., Rufí, I., Soler, J., Terlato, G., Krause, J., Bocherens, H., & Schuenemann, V. J. (2019). Large-scale mitogenomic analysis of the phylogeography of the Late Pleistocene cave bear. Scientific Reports, 9(1): 10700.
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Översti, S., Majander, K., Salmela, E., Salo, K., Arppe, L., Belskiy, S., Etu-Sihvola, H., Laakso, V., Mikkola, E., Pfrengle, S., Putkonen, M., Taavitsainen, J.-P., Vuoristo, K., Wessman, A., Sajantila, A., Oinonen, M., Haak, W., Schuenemann, V. J., Krause, J., Palo, J. U., & Onkamo, P. (2019). Human mitochondrial DNA lineages in Iron-Age Fennoscandia suggest incipient admixture and eastern introduction of farming-related maternal ancestry. Scientific Reports, 9(1): 16883.
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Mittnik, A., Massy, K., Knipper, C., Wittenborn, F., Pfrengle, S., Carlichi-Witjes, N., Deeg, H., Furtwängler, A., Harbeck, M., von Heyking, K., Kociumaka, C., Kucukkalipci, I., Lindauer, S., Metz, S., Staskiewicz, A., Thiel, A., Wahl, J., Haak, W., Pernicka, E., Schiffels, S., Stockhammer, P. W., & Krause, J. (2019). Kinship-based social inequality in Bronze Age Europe. Science, 366(6466): aax6219, pp. 731-734.
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Spyrou, M. A., Keller, M., Tukhbatova, R. I., Scheib, C. L., Nelson, E. A., Andrades Valtueña, A., Neumann, G., Walker, D., Alterauge, A., Carty, N., Cessford, C., Fetz, H., Gourvennec, M., Hartle, R., Henderson, M., von Heyking, K., Inskip, S. A., Kacki, S., Key, F. M., Knox, E. L., Later, C., Maheshwari-Aplin, P., Peters, J., Robb, J. E., Schreiber, J., Kivisild, T., Castex, D., Lösch, S., Harbeck, M., Herbig, A., Bos, K. I., & Krause, J. (2019). Phylogeography of the second plague pandemic revealed through analysis of historical Yersinia pestis genomes. Nature Communications, 10(1): 4470.
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Bos, K. I., Kühnert, D., Herbig, A., Esquivel Gomez, L. R., Andrades Valtueña, A., Barquera Lozano, R. J., Giffin, K., Lankapalli, A. K., Nelson, E. A., Sabin, S., Spyrou, M. A., & Krause, J. (2019). Paleomicrobiology: Diagnosis and evolution of ancient pathogens. Annual Review of Microbiology, 73(1), 639-666.
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Siebke, I., Steuri, N., Furtwängler, A., Ramstein, M., Arenz, G., Hafner, A., Krause, J., & Lösch, S. (2019). Who lived on the Swiss Plateau around 3300 BCE? Analyses of commingled human skeletal remains from the dolmen of Oberbipp. International Journal of Osteoarchaeology, 29(5): oa.2791, pp. 786-796.
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Ning, C., Wang, C.-C., Gao, S., Yang, Y., Zhang, X., Wu, X., Zhang, F., Nie, Z., Tang, Y., Robbeets, M., Ma, J., Krause, J., & Cui, Y. (2019). Ancient genomes reveal Yamnaya-related ancestry and a potential source of Indo-European speakers in Iron Age Tianshan. Current Biology, 29(15), 2526-2532.e4.
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Keller, M., Spyrou, M. A., Scheib, C. L., Neumann, G., Kröpelin, A., Haas-Gebhard, B., Päffgen, B., Haberstroh, J., Lacomba, A. R., Raynaud, C., Cessford, C., Durand, R., Stadler, P., Nägele, K., Bates, J. S., Trautmann, B., Inskip, S. A., Peters, J., Robb, J. E., Kivisild, T., Castex, D., McCormick, M., Bos, K. I., Harbeck, M., Herbig, A., & Krause, J. (2019). Ancient Yersinia pestis genomes from across Western Europe reveal early diversification during the First Pandemic (541–750). Proceedings of the National Academy of Sciences of the United States of America, 116(25), 12363-12372.
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Flegontov, P., Altınışık, N. E., Changmai, P., Rohland, N., Mallick, S., Adamski, N., Bolnick, D. A., Broomandkhoshbacht, N., Candilio, F., Culleton, B. J., Flegontova, O., Friesen, T. M., Jeong, C., Harper, T. K., Keating, D., Kennett, D. J., Kim, A. M., Lamnidis, T. C., Lawson, A. M., Olalde, I., Oppenheimer, J., Potter, B. A., Raff, J., Sattler, R. A., Skoglund, P., Stewardson, K., Vajda, E. J., Vasilyev, S., Veselovskaya, E., O’Rourke, M. G. H. D. H., Krause, J., Pinhasi, R., & Schiffels, S. (2019). Palaeo-Eskimo genetic ancestry and the peopling of Chukotka and North America. Nature, 570, 236-240.
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Jeong, C., Balanovsky, O., Lukianova, E., Kahbatkyzy, N., Flegontov, P., Zaporozhchenko, V., Immel, A., Wang, C.-C., Ixan, O., Khussainova, E., Bekmanov, B., Zaibert, V., Lavryashina, M., Pocheshkhova, E., Yusupov, Y., Agdzhoyan, A., Koshel, S., Bukin, A., Nymadawa, P., Turdikulova, S., Dalimova, D., Churnosov, M., Skhalyakho, R., Daragan, D., Bogunov, Y., Bogunova, A., Shtrunov, A., Dubova, N., Zhabagin, M., Yepiskoposyan, L., Churakov, V., Pislegin, N., Damba, L., Saroyants, L., Dibirova, K., Atramentova, L., Utevska, O., Idrisov, E., Kamenshchikova, E., Evseeva, I., Metspalu, M., Outram, A. K., Robbeets, M., Djansugurova, L., Balanovska, E., Schiffels, S., Haak, W., Reich, D., & Krause, J. (2019). The genetic history of admixture across inner Eurasia. Nature Ecology & Evolution, 3, 966-976.
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Peyrégne, S., Slon, V., Mafessoni, F., de Filippo, C., Hajdinjak, M., Nagel, S., Nickel, B., Essel, E., Le Cabec, A., Wehrberger, K., Conard, N. J., Kind, C. J., Posth, C., Krause, J., Abrams, G., Bonjean, D., Di Modica, K., Toussaint, M., Kelso, J., Meyer, M., Pääbo, S., & Prüfer, K. (2019). Nuclear DNA from two early Neandertals reveals 80,000 years of genetic continuity in Europe. Science Advances, 5(6): eaaw5873.
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Villalba-Mouco, V., Loosdrecht, M. S. v. d., Posth, C., Mora, R., Martínez-Moreno, J., Rojo-Guerra, M., Salazar-García, D. C., Royo-Guillén, J. I., Kunst, M., Rougier, H., Crevecoeur, I., Arcusa-Magallón, H., Tejedor-Rodríguez, C., de Lagrán, I.-G.-M., Garrido-Pena, R., Alt, K. W., Jeong, C., Schiffels, S., Utrilla, P., Krause, J., & Haak, W. (2019). Survival of late pleistocene hunter-gatherer ancestry in the Iberian Peninsula. Current Biology, 29(7), 1169-1177.
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Feldman, M., Fernández-Domínguez, E., Reynolds, L., Baird, D., Pearson, J., Hershkovitz, I., May, H., Goring-Morris, N., Benz, M., Gresky, J., Bianco, R. A., Fairbairn, A., Mustafaoğlu, G., Stockhammer, P. W., Posth, C., Haak, W., Jeong, C., & Krause, J. (2019). Late Pleistocene human genome suggests a local origin for the first farmers of central Anatolia. Nature Communications, 10: 1218.
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Wißing, C., Rougier, H., Baumann, C., Comeyne, A., Crevecoeur, I., Drucker, D. G., Gaudzinski-Windheuser, S., Germonpré, M., Gómez-Olivencia, A., Krause, J., Matthies, T., Naito, Y. I., Posth, C., Semal, P., Street, M., & Bocherens, H. (2019). Stable isotopes reveal patterns of diet and mobility in the last Neandertals and first modern humans in Europe. Scientific Reports, 9: 4433.
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Wang, C.-C., Reinhold, S., Kalmykov, A., Wissgott, A., Brandt, G., Jeong, C., Cheronet, O., Ferry, M., Harney, E., Keating, D., Mallick, S., Rohland, N., Stewardson, K., Kantorovich, A. R., Maslov, V. E., Petrenko, V. G., Erlikh, V. R., Atabiev, B. C., Magomedov, R. G., Kohl, P. L., Alt, K. W., Pichler, S. L., Gerling, C., Meller, H., Vardanyan, B., Yeganyan, L., Rezepkin, A. D., Mariaschk, D., Berezina, N., Gresky, J., Fuchs, K., Knipper, C., Schiffels, S., Balanovska, E., Balanovsky, O., Mathieson, I., Higham, T., Berezin, Y. B., Buzhilova, A., Trifonov, V., Pinhasi, R., Belinskij, A. B., Reich, D., Hansen, S., Krause, J., & Haak, W. (2019). Ancient human genome-wide data from a 3000-year interval in the Caucasus corresponds with eco-geographic regions. Nature Communications, 10(1): 590.
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Bouzouggar, A., Barton, N., Humphrey, L., Talbi, E. H., Boudchiche, L., Krause, J., & Hublin, J.-J. (2019). Les principales découvertes archéologiques dans les séquences paléolithiques des grottes de Taforalt et du Rhafas (Maroc Oriental). Hesperis Tamuda, 54(3), 75-88.
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Feldman, M., Master, D. M., Bianco, R. A., Burri Promerová, M., Stockhammer, P. W., Mittnik, A., Aja, A. J., Jeong, C., & Krause, J. (2019). Ancient DNA sheds light on the genetic origins of early Iron Age Philistines. Science Advances, 5(7): eaax0061, pp. 1-10.
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Flegontov, P., Altinisik, N. E., Changmai, P., Rohland, N., Mallick, S., Bolnick, D. A., Candilio, F., Flegontova, O., Jeong, C., Harper, T. K., Keating, D., Kennett, D. J., Kim, A. M., Lamnidis, T. C., Olalde, I., Raff, J., Sattler, R. A., Skoglund, P., Vajda, E. J., Vasilyev, S., Veselovskaya, E., Hayes, M. G., O’Rourke, D. H., Pinhasi, R., Krause, J., Reich, D., & Schiffels, S. (2019). Palaeo-Eskimo genetic ancestry and the peopling of Chukotka and North America. Nature, 570, 236-240.
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Posth, C., Nägele, K., Colleran, H., Valentin, F., Bedford, S., Gray, R. D., Krause, J., & Powell, A. (2019). Response to “Ancient DNA and its contribution to understanding the human history of the Pacific Islands” (Bedford et al. 2018). Archaeology in Oceania, 54, 57-61.
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Spyrou, M. A., Bos, K. I., Herbig, A., & Krause, J. (2019). Ancient pathogen genomics as an emerging tool for infectious disease research. Nature Reviews Genetics, 20, 323-340.
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Steuri, N., Siebke, I., Furtwängler, A., Szidat, S., Krause, J., Lösch, S., & Hafner, A. (2019). Multiple radiocarbon dating of human remains: Clarifying the chronology and sequences of burials in the late Neolithic dolmen of Oberbipp (Switzerland). Radiocarbon, 61, 1697-1709.
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Lamnidis, T. C., Majander, K., Jeong, C., Salmela, E., Wessman, A., Moiseyev, V., Khartanovich, V., Balanovsky, O., Ongyerth, M., Weihmann, A., Sajantila, A., Kelso, J., Pääbo, S., Onkamo, P., Haak, W., Krause, J., & Schiffels, S. (2018). Ancient Fennoscandian genomes reveal origin and spread of Siberian ancestry in Europe. Nature Communications, 9: 5018.
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Posth, C., Nakatsuka, N., Lazaridis, I., Skoglund, P., Mallick, S., Lamnidis, T. C., Rohland, N., Nägele, K., Adamski, N., Bertolini, E., Broomandkhoshbacht, N., Cooper, A., Culleton, B. J., Ferraz, T., Ferry, M., Furtwängler, A., Haak, W., Harkins, K., Harper, T. K., Hünemeier, T., Lawson, A. M., Llamas, B., Michel, M., Nelson, E. A., Oppenheimer, J., Patterson, N., Schiffels, S., Sedig, J., Stewardson, K., Talamo, S., Wang, C.-C., Hublin, J.-J., Hubbe, M., Harvati, K., Delaunay, A. N., Beier, J., Francken, M., Kaulicke, P., Reyes-Centeno, H., Rademaker, K., Trask, W. R., Robinson, M., Gutierrez, S. M., Prufer, K. M., Salazar-García, D. C., Chim, E. N., Gomes, L. M. P., Alves, M. L., Liryo, A., Inglez, M., Oliveira, R. E., Bernardo, D. V., Barioni, A., Wesolowski, V., Scheifler, N. A., Rivera, M. A., Plens, C. R., Messineo, P. G., Figuti, L., Corach, D., Scabuzzo, C., Eggers, S., DeBlasis, P., Reindel, M., Mendez, C., Politis, G., Tomasto-Cagigao, E., Kennett, D. J., Strauss, A., Fehren-Schmitz, L., Krause, J., & Reich, D. (2018). Reconstructing the deep population history of Central and South America. Cell, 175(5), 1185-1197.
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Furtwängler, A., Reiter, E., Neumann, G. U., Siebke, I., Steuri, N., Hafner, A., Lösch, S., Anthes, N., Schuenemann, V. J., & Krause, J. (2018). Ratio of mitochondrial to nuclear DNA affects contamination estimates in ancient DNA analysis. Scientific Reports, 8: 14075.
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Amorim, C. E. G., Vai, S., Posth, C., Modi, A., Koncz, I., Hakenbeck, S., La Rocca, M. C., Cristina, M., Mende, B., Bobo, D., Pohl, W., Baricco, L. P., Bedini, E., Francalacci, P., Giostra, C., Vida, T., Winger, D., von Freeden, U., Ghirotto, S., Lari, M., Barbujani, G., Krause, J., Caramelli, D., Geary, P. J., & Veeramah, K. R. (2018). Understanding 6th-century barbarian social organization and migration through paleogenomics. Nature Communications, 9: 3547.
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O’Sullivan, N., Posth, C., Coia, V., Schuenemann, V. J., Price, T. D., Wahl, J., Pinhasi, R., Zink, A., Krause, J., & Maixner, F. (2018). Ancient genome-wide analyses infer kinship structure in an Early Medieval Alemannic graveyard. Science Advances, 4(9): 1262.
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Galarza, J. M., Barquera, R., Álvarez, A. M. T., Hernández Zaragoza, D. I., Sevilla, G. P., Tamayo, A., Pérez, M., Dávila, D., Birnberg, L., Alonzo, V. A., Krause, J., & Grijalva, M. (2018). Genetic diversity of the HLA system in human populations from the Sierra (Andean), Oriente (Amazonian) and Costa (Coastal) regions of Ecuador. Human Immunology, 79(9), 639-650.
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Eisenmann, S., Bánffy, E., van Dommelen, P., Hofmann, K. P., Maran, J., Lazaridis, I., Mittnik, A., McCormick, M., Krause, J., Reich, D., & Stockhammer, P. W. (2018). Reconciling material cultures in archaeology with genetic data: The nomenclature of clusters emerging from archaeogenomic analysis. Scientific Reports, 8: 13003.
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Mann, A., Sabin, S., Ziesemer, K., Vågene, Å. J., Schroeder, H., Ozga, A. T., Sankaranarayanan, K., Hofman, C. A., Fellows Yates, J. A., Salazar-García, D. C., Frohlich, B., Aldenderfer, M., Hoogland, M., Read, C., Milner, G. R., Stone, A. C., Lewis, C. M., Krause, J., Hofman, C., Bos, K. I., & Warinner, C. G. (2018). Differential preservation of endogenous human and microbial DNA in dental calculus and dentin. Scientific Reports, 8(1): 9822.
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Schuenemann, V. J., Lankapalli, A. K., Barquera, R., Nelson, E. A., Iraíz Hernández, D., Acuña Alonzo, V., Bos, K. I., Márquez Morfín, L., Herbig, A., & Krause, J. (2018). Historic Treponema pallidum genomes from Colonial Mexico retrieved from archaeological remains. PLOS Neglected Tropical Diseases, 12(6): e0006447.
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Spyrou, M. A., Tukhbatova, R. I., Wang, C.-C., Andrades Valtueña, A., Lankapalli, A. K., Kondrashin, V. V., Tsybin, V. A., Khokhlov, A., Kühnert, D., Herbig, A., Bos, K. I., & Krause, J. (2018). Analysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plague. Nature Communications, 9: 2234.
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Krause-Kyora, B., Susat, J., Key, F. M., Kühnert, D., Bosse, E., Immel, A., Rinne, C., Kornell, S.-C., Yepes, D., Franzenburg, S., Heyne, H. O., Meier, T., Lösch, S., Meller, H., Friederich, S., Nicklisch, N., Alt, K. W., Schreiber, S., Tholey, A., Herbig, A., Nebel, A., & Krause, J. (2018). Neolithic and medieval virus genomes reveal complex evolution of Hepatitis B. eLife, 7: e36666.
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Loosdrecht, M. v. d., Bouzouggar, A., Humphrey, L., Posth, C., Barton, N., Ayinuer-Petri, A., Nickel, B., Nagel, S., Talbi, E. H., Hajraoui, M. A. E., Amzazi, S., Hublin, J.-J., Pääbo, S., Schiffels, S., Meyer, M., Haak, W., Jeong, C., & Krause, J. (2018). Pleistocene North African genomes link Near Eastern and sub-Saharan African human populations. Science, 360(6388), 548-552.
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Hajdinjak, M., Fu, Q., Hübner, A., Petr, M., Mafessoni, F., Grote, S., Skoglund, P., Narasimham, V., Rougier, H., Crevecoeur, I., Semal, P., Soressi, M., Talamo, S., Hublin, J.-J., Gušic, I., Kucan, Ž., Rudan, P., Golovanova, L. V., Doronichev, V. B., Posth, C., Krause, J., Korlevic, P., Nagel, S., Nickel, B., Slatkin, M., Patterson, N., Reich, D., Prüfer, K., Meyer, M., Pääbo, S., & Kelso, J. (2018). Reconstructing the genetic history of late Neanderthals. Nature, 555(7698), 652-656.
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Weiß, C. L., Schuenemann, V. J., Devos, J., Shirsekar, G., Reiter, E., Gould, B. A., Stinchcombe, J. R., Krause, J., & Burbano, H. A. (2016). Temporal patterns of damage and decay kinetics of DNA retrieved from plant herbarium specimens. Royal Society Open Science, 3(6): 160239.
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Fu, Q., Posth, C., Hajdinjak, M., Petr, M., Mallick, S., Fernandes, D., Furtwängler, A., Haak, W., Meyer, M., Mittnik, A., Nickel, B., Peltzer, A., Rohland, N., Slon, V., Talamo, S., Lazaridis, I., Lipson, M., Mathieson, I., Schiffels, S., Skoglund, P., Derevianko, A. P., Drozdov, N., Slavinsky, V., Tsybankov, A., Cremonesi, R. G., Mallegni, F., Gély, B., Vacca, E., Morales, M. R. G., Straus, L. G., Neugebauer-Maresch, C., Teschler-Nicola, M., Constantin, S., Moldovan, O. T., Benazzi, S., Peresani, M., Coppola, D., Lari, M., Ricci, S., Ronchitelli, A., Valentin, F., Thevenet, C., Wehrberger, K., Grigorescu, D., Rougier, H., Crevecoeur, I., Flas, D., Semal, P., Mannino, M. A., Cupillard, C., Bocherens, H., Conard, N. J., Harvati, K., Moiseyev, V., Drucker, D. G., Svoboda, J., Richards, M. P., Caramelli, D., Pinhasi, R., Kelso, J., Patterson, N., Krause, J., Pääbo, S., & Reich, D. (2016). The genetic history of Ice Age Europe. Nature, 534(7606), 200-205.
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64

Spyrou, M. A., Tukhbatova, R. I., Feldman, M., Drath, J., Kacki, S., Heredia, J. B. d., Arnold, S., Sitdikov, A. G., Castex, D., Wahl, J., Gazimzyanov, I. R., Nurgaliev, D. K., Herbig, A., Bos, K. I., & Krause, J. (2016). Historical Y. pestis genomes reveal the European Black Death as the source of ancient and modern plague pandemics. Cell Host & Microbe, 19(6), 874-881.
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63

Krause, J., & Pääbo, S. (2016). Genetic time travel. Genetics, 203(1), 9-12.
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62

Peltzer, A., Jager, G., Herbig, A., Seitz, A., Kniep, C., Krause, J., & Nieselt, K. (2016). EAGER: efficient ancient genome reconstruction. Genome Biology, 17: 60.
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61

Posth, C., Renaud, G., Mittnik, A., Drucker, D. G., Rougier, H., Cupillard, C., Valentin, F., Thevenet, C., Furtwängler, A., Wißing, C., Francken, M., Malina, M., Bolus, M., Lari, M., Gigli, E., Capecchi, G., Crevecoeur, I., Beauval, C., Flas, D., Germonpré, M., van der Plicht, J., Cottiaux, R., Gély, B., Ronchitelli, A., Wehrberger, K., Grigorescu, D., Svoboda, J., Semal, P., Caramelli, D., Bocherens, H., Harvati, K., Conard, N. J., Haak, W., Powell, A., & Krause, J. (2016). Pleistocene mitochondrial genomes suggest a single major dispersal of non-Africans and a late glacial population turnover in Europe. Current Biology, 26(6), 827-833.
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60

Bos, K., Herbig, A., Sahl, J., Waglechner, N., Fourment, M., Forrest, S. A., Klunk, J., Schuenemann, V. J., Poinar, D., Kuch, M., Golding, G. B., Dutour, O., Keim, P., Wagner, D. M., Holmes, E. C., Krause, J., & Poinar, H. N. (2016). Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus. eLife, 5: e12994.
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59

Maixner, F., Krause-Kyora, B., Turaev, D., Herbig, A., Hoopmann, M. R., Hallows, J. L., Kusebauch, U., Vigl, E. E., Malfertheiner, P., Megraud, F., O’Sullivan, N., Cipollini, G., Coia, V., Samadelli, M., Engstrand, L., Linz, B., Moritz, R. L., Grimm, R., Krause, J., Nebel, A., Moodley, Y., Rattei, T., & Zink, A. (2016). The 5300-year-old Helicobacter pylori genome of the Iceman. Science, 351(6269), 162-165.
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58

Mascher, M., Schuenemann, V., Davidovich, U., Marom, N., Himmelbach, A., Hübner, S., Korol, A., David, M., Reiter, E., Riehl, S., Schreiber, M., Vohr, S., Green, R., Dawson, I., Russell, J., Kilian, B., Muehlbauer, G., Waugh, R., Fahima, T., Krause, J., Weiss, E., & Stein, N. (2016). Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley. Nature Genetics, 48(9), 1089-1095.
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57

Mathieson, I., Lazaridis, I., Rohland, N., Mallick, S., Patterson, N., Roodenberg, S. A., Harney, E., Stewardson, K., Fernandes, D., Novak, M., Sirak, K., Gamba, C., Jones, E. R., Llamas, B., Dryomov, S., Pickrell, J., Arsuaga, J. L., de Castro, J. M. B., Carbonell, E., Gerritsen, F., Khokhlov, A., Kuznetsov, P., Lozano, M., Meller, H., Mochalov, O., Moiseyev, V., Guerra, M. A. R., Roodenberg, J., Vergès, J. M., Krause, J., Cooper, A., Alt, K. W., Brown, D., Anthony, D., Lalueza-Fox, C., Haak, W., Pinhas, R., & Reich, D. (2015). Genome-wide patterns of selection in 230 ancient Eurasians. Nature, 528, 499-503.
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56

Stockhammer, P. W., Massy, K., Knipper, C., Friedrich, R., Kromer, B., Lindauer, S., Radosavljević, J., Wittenborn, F., & Krause, J. (2015). Rewriting the Central European Early Bronze Age chronology: Evidence from large-scale radiocarbon dating. PLoS One, e0139705.
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55

Haak, W., Lazaridis, I., Patterson, N., Rohland, N., Mallick, S., Llamas, B., Brandt, G., Nordenfelt, S., Harney, E., Stewardson, K., Fu, Q., Mittnik, A., Bánffy, E., Economou, C., Francken, M., Friederich, S., Pena, R. G., Hallgren, F., Khartanovich, V., Khokhlov, A., Kunst, M., Kuznetsov, P., Meller, H., Mochalov, O., Moiseyev, V., Nicklisch, N., Pichler, S. L., Risch, R., Guerra, M. A. R., Roth, C., Szécsényi-Nagy, A., Wahl, J., Meyer, M., Krause, J., Brown, D., Anthony, D., Cooper, A., Alt, K. W., & Reich, D. (2015). Massive migration from the steppe was a source for Indo-European languages in Europe. Nature, (522), 207-211.
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54

Immel, A., Drucker, D. G., Bonazzi, M., Jahnke, T. K., Munzel, S. C., Schuenemann, V. J., Herbig, A., Kind, C.-J., & Krause, J. (2015). Mitochondrial genomes of giant deers suggest their late survival in Central Europe. Scientific Reports, 5: 10853.
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53

Singh, P., Benjak, A., Schuenemann, V. J., Herbig, A., Avanzi, C., Busso, P., Nieselt, K., Krause, J., Vera-Cabrera, L., & Cole, S. T. (2015). Insight into the evolution and origin of leprosy bacilli from the genome sequence of Mycobacterium lepromatosis. Proceedings of the National Academy of Sciences of the USA, 112 (14), 4459-4464.
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52

Bos, K. I., Jaeger, G., Schuenemann, V. J., Vågene, Å. J., Spyrou, M. A., Herbig, A., Nieselt, K., & Krause, J. (2015). Parallel detection of ancient pathogens via array-based DNA capture. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences, 370(1660): 20130375.
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51

Harkins, K. M., Buikstra, J. E., Campbell, T., Bos, K. I., Johnson, E. D., Krause, J., & Stone, A. C. (2015). Screening ancient tuberculosis with qPCR: Challenges and opportunities. Philosophical Transactions of the Royal Society B: Biological Sciences, 370(1660): 20130622.
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50

Krause, J. (2015). Ancient human migrations. Die Kunde, 64, 87-99.
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49

Schünemann, V., & Krause, J. (2015). Auf der Spur des Schwarzen Todes: Untersuchungen am Pesterreger. Archäologie in Deutschland, 31(2), 6-11.
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48

Shafer, A. B., Wolf, J. B., Alves, P. C., Bergström, L., Bruford, M. W., Brännström, I., Colling, G., Dalén, L., De Meester, L., Ekblom, R., Fawcett, K. D., Fior, S., Hajibabaei, M., Hill, J. A., Hoezel, A. R., Höglund, J., Jensen, E. L., Krause, J., Kristensen, T. N., Krützen, M., McKay, J. K., Norman, A. J., Ogden, R., Österling, E. M., Ouborg, N. J., Piccolo, J., Popović, D., Primmer, C. R., Reed, F. A., Roumet, M., Salmona, J., Schenekar, T., Schwartz, M. K., Segelbacher, G., Senn, H., Thaulow, J., Valtonen, M., Veale, A., Vergeer, P., Vijay, N., Vilà, C., Weissensteiner, M., Wennerström, L., Wheat, C. W., & Zieliński, P. (2015). Genomics and the challenging translation into conservation practice. Trends in Ecology & Evolution, 30(2), 78-87.
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47

Lazaridis, I., Patterson, N., Mittnik, A., Renaud, G., Mallick, S., Kirsanow, K., Sudmant, P. H., Schraiber, J. G., Castellano, S., Lipson, M., Berger, B., Economou, C., Bollongino, R., Fu, Q., Bos, K. I., Nordenfelt, S., Li, H., de Filippo, C., Prüfer, K., Sawyer, S., Posth, C., Haak, W., Hallgren, F., Fornander, E., Rohland, N., Delsate, D., Francken, M., Guinet, J.-M., Wahl, J., Ayodo, G., Babiker, H. A., Bailliet, G., Balanovska, E., Balanovsky, O., Barrantes, R., Bedoya, G., Ben-Ami, H., Bene, J., Berrada, F., Bravi, C. M., Brisighelli, F., Busby, G. B. J., Cali, F., Churnosov, M., Cole, D. E. C., Corach, D., Damba, L., van Driem, G., Dryomov, S., Dugoujon, J.-M., Fedorova, S. A., Romero, I. G., Gubina, M., Hammer, M., Henn, B. M., Hervig, T., Hodoglugil, U., Jha, A. R., Karachanak-Yankova, S., Khusainova, R., Khusnutdinova, E., Kittles, R., Kivisild, T., Klitz, W., Kucinskas, V., Kushniarevich, A., Laredj, L., Litvinov, S., Loukidis, T., Mahley, R. W., Melegh, B., Metspalu, E., Molina, J., Mountain, J., Näkkäläjärvi, K., Nesheva, D., Nyambo, T., Osipova, L., Parik, J., Platonov, F., Posukh, O., Romano, V., Rothhammer, F., Rudan, I., Ruizbakiev, R., Sahakyan, H., Sajantila, A., Salas, A., Starikovskaya, E. B., Tarekegn, A., Toncheva, D., Turdikulova, S., Uktveryte, I., Utevska, O., Vasquez, R., Villena, M., Voevoda, M., Winkler, C. A., Yepiskoposyan, L., Zalloua, P., Zemunik, T., Cooper, A., Capelli, C., Thomas, M. G., Ruiz-Linares, A., Tishkoff, S. A., Singh, L., Thangaraj, K., Villems, R., Comas, D., Sukernik, R., Metspalu, M., Meyer, M., Eichler, E. E., Burger, J., Slatkin, M., Pääbo, S., Kelso, J., Reich, D., & Krause, J. (2014). Ancient human genomes suggest three ancestral populations for present-day Europeans. Nature, 513(7518), 409-413.
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46

Zink, A., Wann, L. S., Thompson, R. C., Keller, A., Maixner, F., Allam, A. H., Finch, C. E., Frohlich, B., Kaplan, H., Lombardi, G. P., Sutherland, M. L., Sutherland, J. D., Watson, L., Cox, S. L., Miyamoto, M. I., Narula, J., Stewart, A. F., Thomas, G. S., & Krause, J. (2014). Genomic correlates of atherosclerosis in ancient humans. Global Heart, 9(2), 203-209.
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45

Yoshida, K., Burbano, H. A., Krause, J., Thines, M., Weigel, D., & Kamoun, S. (2014). Mining herbaria for plant pathogen genomes: Back to the future. PLoS Pathogens, 10(4): e1004028.
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44

Skoglund, P., Northoff, B. H., Shunkov, M. V., Derevianko, A. P., Pääbo, S., Krause, J., & Jakobsson, M. (2014). Separating endogenous ancient DNA from modern day contamination in a Siberian Neandertal. Proceedings of the National Academy of Sciences of the United States of America, 111(6), 2229-2234.
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43

Bos, K. I., Harkins, K. M., Herbig, A., Coscolla, M., Weber, N., Comas, I., Forrest, S. A., Bryant, J. M., Harris, S. R., Schuenemann, V. J., Campbell, T. J., Majander, K., Wilbur, A. K., Guichon, R. A., Steadman, D. L. W., Cook, D. C., Niemann, S., Behr, M. A., Zumarraga, M., Bastida, R., Huson, D., Nieselt, K., Young, D., Parkhill, J., Buikstra, J. E., Gagneux, S., Stone, A. C., & Krause, J. (2014). Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis. Nature, 514(7523), 494-497.
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42

Krause, J. (2014). Die molekulare Stammesgeschichte des Menschen: Steckt in uns allen ein kleiner Neandertaler? Senckenberg: Natur, Forschung, Museum; das Senckenberg-Wissenschaftsmagazin, 144(7/8), 274-277.
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41

Mendum, T. A., Schuenemann, V. J., Roffey, S., Taylor, G., Wu, H., Singh, P., Tucker, K., Hinds, J., Cole, S. T., Kierzek, A. M., Nieselt, K., Krause, J., & Stewart, G. R. (2014). Mycobacterium leprae genomes from a British medieval leprosy hospital: Towards understanding an ancient epidemic. BMC Genomics, 15: 270.
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40

Schünemann, V. J., & Krause, J. (2014). Wo der Mensch auf den Hund kam: Genetische Untersuchungen deuten darauf hin, dass der Ursprung der Domestikation in Europa liegt. Senckenberg: Natur, Forschung, Museum; das Senckenberg-Wissenschaftsmagazin, 144(7/8), 278-281.
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39

Thalmann, O., Shapiro, B., Cui, P., Schuenemann, V. J., Sawyer, S., Greenfield, D. L., Germonpré, M. B., Sablin, M. V., López-Giráldez, F., Domingo-Roura, X., Napierala, H., Uerpmann, H.-P., Loponte, D. M., Acosta, A. A., Giemsch, L., Schmitz, R. W., Worthington, B., Buikstra, J. E., Druzhkova, A., Graphodatsky, A. S., Ovodov, N. D., Wahlberg, N., Freedman, A. H., Schweizer, R. M., Koepfli, K.-P., Leonard, J. A., Meyer, M., Krause, J., Pääbo, S., Green, R. E., & Wayne, R. K. (2013). Complete mitochondrial genomes of ancient canids suggest a European origin of domestic dogs. Science, 342(6160), 871-874.
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38

Schuenemann, V. J., Singh, P., Mendum, T. A., Krause-Kyora, B., Jaeger, G., Bos, K., Herbig, A., Economou, C., Benjak, A., Busso, P., Nebel, A., Boldsen, J. L., Kjellstrom, A., Wu, H., Stewart, G. R., Taylor, G. M., Bauer, P., Lee, O.-Y.-.-C., Wu, H. H. T., Minnikin, D. E., Besra, G. S., Tucker, K., Roffey, S., Sow, S. O., Cole, S. T., Nieselt, K., & Krause, J. (2013). Genome-wide comparison of medieval and modern Mycobacterium leprae. Science, 341(6142), 179-183.
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37

Fu, Q., Mittnik, A., Johnson, P. L., Bos, K., Lari, M., Bollongino, R., Sun, C., Giemsch, L., Schmitz, R., Burger, J., Ronchitelli, A. M., Martini, F., Cremonesi, R. G., Svoboda, J., Bauer, P., Caramelli, D., Castellano, S., Reich, D., Pääbo, S., & Krause, J. (2013). A revised timescale for human evolution based on ancient mitochondrial genomes. Current Biology, 23(7), 553-559.
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36

Guschanski, K., Krause, J., Sawyer, S., Valente, L. M., Bailey, S., Finstermeier, K., Sabin, R., Gilissen, E., Sonet, G., Nagy, Z. T., Lenglet, G., Mayer, F., & Savolainen, V. (2013). Next-generation museomics disentangles one of the largest primate radiations. Systematic Biology, 62(4), 539-554.
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35

Yoshida, K., Schuenemann, V. J., Cano, L. M., Pais, M., Mishra, B., Sharma, R., Lanz, C., Martin, F. N., Kamoun, S., Krause, J., Thines, M., Weigel, D., & Burbano, H. A. (2013). The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine. eLife, 2: e00731.
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34

Bos, K. I., Stevens, P., Nieselt, K., Poinar, H. N., DeWitte, S. N., & Krause, J. (2012). Yersinia pestis: New evidence for an old infection. PLoS One, 7(11): e49803.
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33

Krause, J. (2012). Human origins and the search for “Missing Links”. PLoS Biology, 10(5): e1001333.
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32

Sawyer, S., Krause, J., Guschanski, K., Savolainen, V., & Pääbo, S. (2012). Temporal patterns of nucleotide misincorporations and DNA fragmentation in ancient DNA. PLoS One, 7(3): e34131.
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31

Fu, Q., Rudan, P., Pääbo, S., & Krause, J. (2012). Complete mitochondrial genomes reveal neolithic expansion into Europe. PLoS One, 7(3): e32473.
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30

Bos, K. I., Schuenemann, V. J., Golding, G. B., Burbano, H. A., Waglechner, N., Coombes, B. K., McPhee, J. B., DeWitte, S. N., Meyer, M., Schmedes, S., Wood, J., Earn, D. J. D., Herring, D. A., Bauer, P., Poinar, H. N., & Krause, J. (2011). A draft genome of Yersinia pestis from victims of the Black Death. Nature, 478(7370), 506-510.
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29

Jordan, S., Krause, J., Prager, A., Mitrovic, M., Jonjic, S., Koszinowski, U. H., & Adler, B. (2011). Virus progeny of murine cytomegalovirus bacterial artificial chromosome pSM3fr show reduced growth in salivary glands due to a fixed mutation of MCK-2. Journal of Virology, 85(19), 10346-10353.
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28

Schuenemann, V. J., Bos, K. I., DeWitte, S., Schmedes, S., Jamieson, J., Mittnik, A., Forrest, S., Coombes, B. K., Wood, J. W., Earn, D. J. D., White, W., Krause, J., & Poinar, H. N. (2011). Targeted enrichment of ancient pathogens yielding the pPCP1 plasmid of Yersinia pestis from victims of the Black Death. Proceedings of the National Academy of Sciences, 108(38), E746-E752.
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27

Stoneking, M., & Krause, J. (2011). Learning about human population history from ancient and modern genomes. Nature Reviews Genetics, 12(9), 603-614.
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26

Krause, J., Briggs, A. W., Kircher, M., Maricic, T., Zwyns, N., Derevianko, A. P., & Pääbo, S. (2010). A complete mtDNA genome of an early modern human from Kostenki, Russia. Current Biology, 20(3), 231-236.
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25

Briggs, A. W., Stenzel, U., Meyer, M., Krause, J., Kircher, M., & Pääbo, S. (2010). Removal of deaminated cytosines and detection of in vivo methylation in ancient DNA. Special Issue on Synthetic Biology, e87, pp. 1-12.
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24

Burbano, H. A., Hodges, E., Green, R. E., Briggs, A. W., Krause, J., Meyer, M., Good, J. M., Maricic, T., Johnson, P. L. F., Xuan, Z., Rooks, M., Bhattacharjee, A., Brizuela, L., Albert, F. W., Rasilla, M. d. l., Fortea, J., Rosas, A., Lachmann, M., Hannon, G. J., & Pääbo, S. (2010). Targeted investigation of the Neandertal genome by array-based sequence capture. Science, 328(5979), 723-725.
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23

Green, R. E., Krause, J., Briggs, A. W., Maricic, T., Stenzel, U., Kircher, M., Patterson, N., Li, H., Zhai, W., Fritz, M.-H.-Y., Hansen, N. F., Durand, E. Y., Malaspinas, A.-S., Jensen, J. D., Marques-Bonet, T., Alkan, C., Prüfer, K., Meyer, M., Burbano, H. A., Good, J. M., Schultz, R., Aximu-Petri, A., Butthoff, A., Höber, B., Höffner, B., Siegemund, M., Weihmann, A., Nusbaum, C., Lander, E. S., Russ, C., Novod, N., Affourtit, J., Egholm, M., Verna, C., Rudan, P., Brajkovic, D., Kucan, Z., Gusic, I., Doronichev, V. B., Golovanova, L. V., Lalueza-Fox, C., Rasilla, M. d. l., Fortea, J., Rosas, A., Schmitz, R. W., Johnson, P. L. F., Eichler, E. E., Falush, D., Birney, E., Mullikin, J. C., Slatkin, M., Nielsen, R., Kelso, J., Lachmann, M., Reich, D., & Pääbo, S. (2010). A draft sequence of the Neandertal genome. Science, 328(5979), 710-722.
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22

Krause, J. (2010). From genes to genomes: What is new in ancient DNA? Mitteilungen der Gesellschaft für Urgeschichte, 19, 11-34.
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21

Krause, J., Fu, Q., Good, J. M., Viola, B., Shunkov, M. V., Derevianko, A. P., & Pääbo, S. (2010). The complete mitochondrial DNA genome of an unknown hominin from southern Siberia. Nature, 464(7290), 894-897.
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20

Reich, D., Green, R. E., Kircher, M., Krause, J., Patterson, N., Durand, E. Y., Viola, B., Briggs, A. W., Stenzel, U., Johnson, P. L. F., Maricic, T., Good, J. M., Marques-Bonet, T., Alkan, C., Fu, Q., Mallick, S., Li, H., Meyer, M., Eichler, E. E., Stoneking, M., Richards, M., Talamo, S., Shunkov, M. V., Derevianko, A. P., Hublin, J.-J., Kelso, J., Slatkin, M., & Pääbo, S. (2010). Genetic history of an archaic hominin group from Denisova Cave in Siberia. Nature, 468(7327), 1053-1060.
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19

Briggs, A. W., Good, J. M., Green, R. E., Krause, J., Maricic, T., Stenzel, U., & Pääbo, S. (2009). Primer extension capture: Targeted sequence retrieval from heavily degraded DNA sources (Videodocumentation). Journal of Visualized Experiments, (31).
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18

Briggs, A. W., Good, J. M., Green, R. E., Krause, J., Maricic, T., Stenzel, U., Lalueza-Fox, C., Rudan, P., Brajkovic, D., Kucan, Z., Gusic, I., Schmitz, R. W., Doronichev, V. B., Golovanova, L. V., de la Rasilla, M., Fortea, J., Rosas, A., & Pääbo, S. (2009). Targeted retrieval and analysis of five Neandertal mtDNA genomes. Science, 325(5938), 318-321.
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17

Green, R. E., Briggs, A. W., Krause, J., Prüfer, K., Burbano, H. A., Siebauer, M., Lachmann, M., & Pääbo, S. (2009). The Neandertal genome and ancient DNA authenticity. EMBO Journal, 28(17), 2494-2502.
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16

Ptak, S. E., Enard, W., Wiebe, V., Hellmann, I., Krause, J., Lachmann, M., & Pääbo, S. (2009). Linkage disequilibrium extends across putative selected sites in FOXP2. Molecular Biology and Evolution, 26(10), 2181-2184.
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15

Green, R. E., Malaspinas, A.-S., Krause, J., Briggs, A. W., Johnson, P. L. F., Uhler, C., Meyer, M., Good, J. M., Maricic, T., Stenzel, U., Prüfer, K., Siebauer, M., Burbano, H. A., Ronan, M. T., Rothberg, J. M., Egholm, M., Rudan, P., Brajkovic, D., Kucan, Z., Gusic, I., Wikström, M., Laakkonen, L., Kelso, J., Slatkin, M., & Pääbo, S. (2008). A complete Neandertal mitochondrial genome sequence determined by high-throughput sequencing. Cell, 134(3), 416-426.
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14

Krause, J., Unger, T., Noçon, A., Malaspinas, A.-S., Kolokotronis, S.-O., Stiller, M., Soibelzon, L., Spriggs, H., Dear, P. H., Briggs, A. W., Bray, S. C. E., O'Brien, S. J., Rabeder, G., Matheus, P., Cooper, A., Slatkin, M., Pääbo, S., & Hofreiter, M. (2008). Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near the Miocene-Pliocene boundary. BMC Evolutionary Biology, 8: 220.
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13

Lalueza-Fox, C., Gigli, E., de la Rasilla, M., Fortea, J., Rosas, A., Bertranpetit, J., & Krause, J. (2008). Genetic characterization of the ABO blood group in Neandertals. BMC Evolutionary Biology, 8: 342.
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12

Meyer, M., Briggs, A. W., Maricic, T., Höber, B., Höffner, B., Krause, J., Weihmann, A., Pääbo, S., & Hofreiter, M. (2008). From micrograms to picograms: Quantitative PCR reduces the material demands of high-throughput sequencing. Nucleic Acids Research, 36(1): e5.
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11

Briggs, A. W., Stenzel, U., Johnson, P. L. F., Green, R. E., Kelso, J., Prüfer, K., Meyer, M., Krause, J., Ronan, M. T., Lachmann, M., & Pääbo, S. (2007). Patterns of damage in genomic DNA sequences from a Neandertal. Proceedings of the National Academy of Sciences of the United States of America, 104(37), 14616-14621.
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10

Krause, J., Lalueza-Fox, C., Ludovic, O., Enard, W., Green, R. E., Burbano, H. A., Hublin, J.-J., Hänni, C., Fortea, J., de la Rasilla, M., Bertranpetit, J., Rosas, A., & Pääbo, S. (2007). The derived FOXP2 variant of modern humans was shared with Neandertals. Current Biology, 17(21), 1908-1912.
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9

Krause, J., Orlando, L., Serre, D., Viola, B., Prüfer, K., Richards, M. P., Hublin, J.-J., Hänni, C., Derevianko, A. P., & Pääbo, S. (2007). Neanderthals in central Asia and Siberia. Nature, 449(7164), 902-904.
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8

Green, R. E., Krause, J., Ptak, S. E., Briggs, A. W., Ronan, M. T., Simons, J. F., Du, L., Egholm, M., Rothberg, J. M., Paunovic, M., & Pääbo, S. (2006). Analysis of one million base pairs of Neanderthal DNA. Nature, 444, 330-336.
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7

Lalueza-Fox, C., Krause, J., Caramelli, D., Catalano, G., Milani, L., Sampietro, M. L., Calafell, F., Martinez-Maza, C., Bastir, M., García-Tabernero, A., de la Rasilla, M., Fortea, J., Pääbo, S., Bertranpetit, J., & Rosas, A. (2006). Mitochondrial DNA of an Iberian neandertal suggests a population affinity with other European neandertals. Current Biology, 16(16), R629-R630.
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6

Römpler, H., Dear, P. H., Krause, J., Meyer, M., Rohland, N., Schöneberg, T., Spriggs, H., Stiller, M., & Hofreiter, M. (2006). Multiplex amplification of ancient DNA. Nature Protocols, 1(2), 720-728.
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5

Krause, J., Dear, P. H., Pollack, J. L., Slatkin, M., Spriggs, H., Barnes, I., Lister, A. M., Ebersberger, I., Pääbo, S., & Hofreiter, M. (2006). Multiplex amplification of the mammoth mitochondrial genome and the evolution of Elephantidae. Nature, 439(7077), 724-727.
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4

Noonan, J. P., Coop, G., Kudaravalli, S., Smith, D., Krause, J., Alessi, J., Chen, J., Platt, D., Pääbo, S., Pritchard, J. K., & Rubin, E. M. (2006). Sequencing and analysis of Neanderthal genomic DNA. Science, 314, 1113-1118.
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3

Noonan, J. P., Hofreiter, M., Smith, D., Priest, J. R., Rohland, N., Rabeder, G., Krause, J., Detter, J. C., Pääbo, S., & Rubin, E. M. (2005). Genomic sequencing of Pleistocene cave bears. Science, 309(5734), 597-599.
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2

Heißig, F., Krause, J., Bryk, J., Khaitovich, P., Enard, W., & Pääbo, S. (2005). Functional analysis of human and chimpanzee promoters. Genome Biology, 6: R57.
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1

Pääbo, S., Poinar, H. N., Serre, D., Jänicke-Després, V. R., Hebler, J., Rohland, N., Kuch, M., Krause, J., Vigilant, L., & Hofreiter, M. (2004). Genetic analyses from ancient DNA. Annual Review of Genetics, 38, 645-679.
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Books

3

Meller, H., Krause, J., Haak, W., & Risch, R. (Eds.). (2023). Kinship, sex, and biological relatedness: the contribution of archaeogenetics to the understanding of social and biological relations: 15. Mitteldeutscher Archäologentag vom 6. bis 8. Oktober 2022 in Halle (Saale). Halle (Saale): Landesamt für Denkmalpflege und Archäologie Sachsen-Anhalt - Landesmuseum für Vorgeschichte.
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2

Krause, J., & Trappe, T. (2021). Hybris: Die Reise der Menschheit: Zwischen Aufbruch und Scheitern. Berlin: Propyläen.
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1

Krause, J., & Trappe, T. (2019). Die Reise unserer Gene: Eine Geschichte über uns und unsere Vorfahren. Berlin: Propyläen Verlag.
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Book Chapters

17

Krause, J. (2023). Über Gene, Menschen und Geschichte: ein Gespräch mit dem Archäogenetiker Johannes Krause, Direktor des Max-Planck-Instituts für evolutionäre Anthropologie, Leipzig. In V. Krason, & N.-H. Lehmann (Eds.), Von Genen und Menschen: wer wir sind und werden könnten (pp. 39-42). Göttingen: Wallstein Verlag.
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16

Mittnik, A., Massy, K., Knipper, C., Friedrich, R., Krause, J., & Stockhammer, P. W. (2023). Kinship, status and mobility in the Bronze Age Lech Valley. In H. Meller, J. Krause, W. Haak, & R. Risch (Eds.), Kinship, sex, and biological relatedness: the contribution of archaeogenetics to the understanding of social and biological relations: 15. Mitteldeutscher Archäologentag vom 6. bis 8. Oktober 2022 in Halle (Saale) (pp. 195-217). Halle (Saale): Landesamt für Denkmalpflege und Archäologie Sachsen-Anhalt - Landesmuseum für Vorgeschichte.
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15

Risch, R., Haak, W., Krause, J., & Meller, H. (2023). Kinship, Sex, and Biological Relatedness – The contribution of archaeogenetics to the understanding of social relations. In H. Meller, J. Krause, W. Haak, & R. Risch (Eds.), Kinship, sex, and biological relatedness: the contribution of archaeogenetics to the understanding of social and biological relations: 15. Mitteldeutscher Archäologentag vom 6. bis 8. Oktober 2022 in Halle (Saale) (pp. 9-25). Halle (Saale): Landesamt für Denkmalpflege und Archäologie Sachsen-Anhalt - Landesmuseum für Vorgeschichte.
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14

Rivollat, M., Rohrlach, A. B., Ringbauer, H., Childebayeva, A., Mendisco, F., Barquera, R., Szolek, A., Colleraa, H., Le Roy, M., Aron, F., Pemonge, M.-H., Späth, E., Télouk, P., Rey, L., Goude, G., Balter, V., Krause, J., Rottier, S., Deguilloux, M.-F., & Haak, W. (2023). Investigating Neolithic social structures on the basis of unprecedentedly large family trees from the site Gurgy ›les Noisats‹ in France. In H. Meller, J. Krause, W. Haak, & R. Risch (Eds.), Kinship, sex, and biological relatedness: the contribution of archaeogenetics to the understanding of social and biological relations: 15. Mitteldeutscher Archäologentag vom 6. bis 8. Oktober 2022 in Halle (Saale) (pp. 149-160). Halle (Saale): Landesamt für Denkmalpflege und Archäologie Sachsen-Anhalt - Landesmuseum für Vorgeschichte.
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13

Krause, J., & Müller-Wille, S. (2022). Ist der Mensch schon fertig? Johannes Krause und Staffan Müller-Wilke, Moderatorin; Ulrike Heckmann. In P. Nickl, P. M. Steiner, & A. Verrone (Eds.), Weisheit und Wissenschaft: Texte zum 7. Festival der Philosophie, Hannover 2021 (pp. 71-96). Berlin: LIT VERLAG Dr. W. Hopf.
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12

Traverso, L., Gnecchi Ruscone, G. A., Hiß, A. N., Herbig, A., Hofmanová, Z., & Krause, J. (2022). The origin and genetic history of the Avars. In Grenzüberschreitungen – Reiternomaden in Mitteleuropa, ihre östlichen Wurzeln und Verbindungen = Crossing boundaries – Mounted nomads in Central Europe, their eastern roots and connections. Halle (Saale): Landesamt für Denkmalpflege und Archäologie Sachsen-Anhalt, Landesmuseum für Vorgeschichte.
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11

Krause, J. (2020). Die genetische Herkunft der Europäer: Biologische Anpassung und Mobilität in der Vorgeschichte. In C. Ehlers, & H. Grewe (Eds.), "Rechtsräume": Historische und archäologische Annäherungen (pp. 91-104). Frankfurt am Main: Klostermann.
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10

Lösch, S., Siebke, I., Furtwängler, A., Steuri, N., Hafner, A., Szidat, S., & Krause, J. (2020). Bioarchäologische Untersuchungen der Knochen aus dem Dolmen von Oberbipp, Steingasse. In Archäologie Bern - Jahrbuch des Archäologischen Dienstes des Kantons Bern (pp. 202-230). Bern: Rub Media.
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9

Krause, J., & Haak, W. (2017). Neue Erkenntnisse zur genetischen Geschichte Europas. In H. Meller (Ed.), Migration und Integration von der Urgeschichte bis zum Mittelalter: 9. Mitteldeutscher Archäologentag vom 20.-22. Oktober 2016 in Halle (Saale) (pp. 21-38). Halle (Saale): Landesamt für Denkmalpflege und Archäologie Sachsen-Anhalt, Landesmuseum für Vorgeschichte.
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8

Massy, K., Knipper, C., Mittnik, A., Kraus, S., Pernicka, E., Wittenborn, F., Krause, J., & Stockhammer, P. W. (2017). Patterns of transformation from the Final Neolithic to the Early Bronze Age: A case study from the Lech Valley South of Augsburg. In J. Maran (Ed.), Appropriating innovations: Entangled knowledge in Eurasia, 5000‒1500 BCE (pp. 241-261). Oxford: Oxbow Books.
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7

Mittnik, A., & Krause, J. (2016). Genetic analysis of the Dolní Věstonice human remains. In J. Svoboda (Ed.), Dolní Věstonice II: Chronostratigraphy, Paleoethnology, Paleoanthropology (pp. 377-384). Brno: Academy of Sciences of the Czech Republic, Institute of Archeology.
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6

Vågene, Å. J., Krause, J., & Bos, K. I. (2016). Metagenomic analysis and mitochondrial genome reconstruction of the post-medieval individual from Moneen Cave. In M. Dowd (Ed.), Archaeological excavations in Moneen Cave, the Burren, Co. Clare (pp. 49-52). Oxford: Archaeopress.
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5

Mittnik, A., & Krause, J. (2015). The Oberkassel double burial from a genetic perspective. In L. Giemsch, & R. Schmitz (Eds.), The late glacial burial from Oberkassel revisited (pp. 223-229). Darmstadt: Verl. Phillip von Zabern.
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4

Stockhammer, P. W., Massy, K., Knipper, C., Friedrich, R., Kromer, B., Lindauer, S., Radosavljević, J., Pernicka, E., & Krause, J. (2015). Kontinuität und Wandel vom Endneolithikum zur frühen Bronzezeit in der Region Augsburg. In H. Meller (Ed.), 2200 BC - Ein Klimasturz als Ursache für den Zerfall der Alten Welt? 7. Mitteldeutscher Archäologentag vom 23. bis 26. Oktober 2014 in Halle (Saale) (pp. 617-642).
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3

Bollongino, R., Mittnik, A., & Krause, J. (2014). Ein kleines Molekül erschließt ein großes Archiv. In L. Giemsch, & M. Hegewisch (Eds.), Eiszeitjäger: Leben im Paradies; Europa vor 15000 Jahren; Begleitbuch zur Ausstellung Eiszeitjäger - Leben im Paradies. Europa vor 15000 Jahren, LVR-LandesMuseum Bonn: 23. Oktober 2014 bis 28. Juni 2015 (pp. 204-213). Mainz: Nünnerich-Asmus.
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2

Schünemann, V. J., & Krause, J. (2014). Auf den Hund gekommen. In L. Giemsch, & M. Hegewisch (Eds.), Eiszeitjäger: Leben im Paradies; Europa vor 15000 Jahren; Begleitbuch zur Ausstellung Eiszeitjäger - Leben im Paradies. Europa vor 15000 Jahren, LVR-LandesMuseum Bonn: 23. Oktober 2014 bis 28. Juni 2015 (pp. 214-219). Mainz: Nünnerich-Asmus.
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1

Krause, J. (2013). Ancient human migrations. In R. Neck, & H. Schmidinger (Eds.), Migration: [Österreichischer Wissenschaftstag 2011] (pp. 45-64). Wien: Böhlau.
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